Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1314 |
Symbol | |
ID | 5106564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1474610 |
End bp | 1475320 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640502542 |
Product | peptidylprolyl isomerase, FKBP-type |
Protein accession | YP_001186811 |
Protein GI | 146306346 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000539043 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGC ATCGTTTGGC GGCGGCAGTT GCCCTGGTAG GCCTGGTGCT CGCCGGTTGC GATTCGCAAA CCAGCGAAGT CGAACTCAAG AGCCCGGCGC AGAAGGCTTC CTACGGTATC GGTCTGAACA TGGGGCGCAG CCTGTCCGAA GAGGGCATGG ACGATCTGGA CTCCAAGGCC GTCGCTCAGG GTATCGAGGA CGCGCTGGCG AAGAAGGAGC CGCGCATCAA GGACGAAGAC ATGATCGAGG CCTTCTCCTT CCTGCAGAAC CGTGCCGAAG AGCGCATGGC TGCCCTGAAC AAGGAAGCGG CCGAGGCTGG CAAGAAGTTC CTCGAAGAGA ACGGCAAGCG CGAAGGCGTG GTTACCACCG AATCCGGTCT GCAGTACGAA GTGGTGAAGA AGACCGACGG TGCGCAACCC AAGGAAACCG ACGTGGTGAC CGTTCACTAC GAAGGCAAGC TGACCGACGG TAGCGTGTTC GACAGCTCCG TCGCACGTGG CAGCCCCATC GATCTGCCGG TCGGTGGCGT GATCCCGGGT TGGGTCGAAG GTCTGCAGTT GATGCACGTG GGCGAGAAGT ACAAGCTGTA CATCCCCAGT GAGCTGGCCT ACGGCGAACA GAGCCCATCT CCGGCCATCC CCGCCAACTC GGTGCTGGTG TTCGATCTTG AGCTGATCGG CATCAAGGAT CAGGCAGACG CGCAGCAGTA A
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Protein sequence | MKQHRLAAAV ALVGLVLAGC DSQTSEVELK SPAQKASYGI GLNMGRSLSE EGMDDLDSKA VAQGIEDALA KKEPRIKDED MIEAFSFLQN RAEERMAALN KEAAEAGKKF LEENGKREGV VTTESGLQYE VVKKTDGAQP KETDVVTVHY EGKLTDGSVF DSSVARGSPI DLPVGGVIPG WVEGLQLMHV GEKYKLYIPS ELAYGEQSPS PAIPANSVLV FDLELIGIKD QADAQQ
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