Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1281 |
Symbol | |
ID | 5109097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1440231 |
End bp | 1440905 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640502506 |
Product | exsB protein |
Protein accession | YP_001186778 |
Protein GI | 146306313 |
COG category | [R] General function prediction only |
COG ID | [COG0603] Predicted PP-loop superfamily ATPase |
TIGRFAM ID | [TIGR00364] exsB protein |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.691809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.984121 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA AGAAAGCGGT CATCCTCCTT TCCGGCGGCC TGGATTCGGC CACCGTGGTG GCCATGGCCA GGGCCGAGGG CTACGCCTGC TACAGCATGA GCTTCGATTA CGGGCAGCGT CATCGCGCCG AGCTGCAGGC GGCCGAGCGC GTCGCCCGGC AACTGGGTGT GGTCGAGCAC AAGGTGGTCG GCCTGAATCT CAACGGCATC GGTGGCTCGG CGCTGACAGA CAGCAGCATC GCGGTTCCGG AAACACCGGG CGAAGGCATC CCGGTGACCT ACGTGCCGGC GCGCAACACG GTGTTCCTGT CCCTGGCGCT GGGCTGGGCC GAGGTGCTGG GGGCGCGCGA TATCTTCATC GGCGTCAATG CGGTGGACTA CTCGGGCTAT CCCGATTGCC GCCCGGAGTT CGTCGAGGCT TTCGAGCGCA TGGCCAACCT TGCGACCAAG GCTGGTGTGG AGGGGCAGGG CTTTGCCATT CGTGCGCCGC TGCAGCAGAT GAGCAAGGGC GAGATCATCC AGGCCGGTAT GCGCCTAGGC GTGGACTATG CGCTGACCGT CTCCTGCTAC CAGGCCGACG ATGACGGCCG CGCCTGTGGC AAGTGCGACA GCTGCCGCCT GCGCGCCGCC GGTTTTGCCG CAGCCGGCGT GCCCGATGCC ACTCGCTACT TCTGA
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Protein sequence | MSDKKAVILL SGGLDSATVV AMARAEGYAC YSMSFDYGQR HRAELQAAER VARQLGVVEH KVVGLNLNGI GGSALTDSSI AVPETPGEGI PVTYVPARNT VFLSLALGWA EVLGARDIFI GVNAVDYSGY PDCRPEFVEA FERMANLATK AGVEGQGFAI RAPLQQMSKG EIIQAGMRLG VDYALTVSCY QADDDGRACG KCDSCRLRAA GFAAAGVPDA TRYF
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