| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1274 |
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| Symbol | |
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| ID | 5109090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1434534 |
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| End bp | 1435229 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640502499 |
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| Product | MotA/TolQ/ExbB proton channel |
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| Protein accession | YP_001186771 |
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| Protein GI | 146306306 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.232758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.304845 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGAAGCTA ACGCCGTTGA TCATATGTCG ATGTGGAGTC TGATCAGTAA CGCCAGTCTG
TTGGTTCAGC TGGTGATGCT GACCCTGGTG GCCGCCTCGG TCATTTCCTG GGTGATGATC
TTCCAGCGTA GTAATGCCAT CCGCGCCGCC AAGCGTGCTC TGGACAACTT CGAGGATCGT
TTCTGGTCCG GTATCGACCT GTCCAAGCTG TATCGCCAGG CCGGCAGCAA CCCCGATCCG
GATTCCGGTC TGGAGCAGAT CTTCCGTGCC GGCTTCAAGG AATTTTCCCG TCTGCGTCAG
CAGCAGGGCG TCGACCCGGA CGCGGTGATG GACGGCGTGG CGCGTGCCAT GCGCGTGGCC
ATTTCCCGCG AGGAAGAGAA GCTGGAAACC GCGCTGCCGT TTCTCGCCAC CGTTGGTTCC
ACCAGCCCGT ACATCGGCCT GTTCGGTACC GTGTGGGGCA TCATGAACTC CTTCCGCGGC
CTGGCCCAGG TGCAGCAGGC CACCCTGGCC ACCGTCGCCC CGGGTATCGC CGAAGCGCTG
ATCGCCACCG CCATCGGTCT GTTCGCGGCG ATTCCGGCGG TCATCGCCTA CAACCGCTTC
TCTGCCCGCG GCGAAATGCT GATCGGCCGC TACTACACCT TCGCCGACGA GTTCCAGGCC
ATCCTGCACC GCAAGGTGCA CACCTCGGAA GACTAA
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| Protein sequence | MEANAVDHMS MWSLISNASL LVQLVMLTLV AASVISWVMI FQRSNAIRAA KRALDNFEDR
FWSGIDLSKL YRQAGSNPDP DSGLEQIFRA GFKEFSRLRQ QQGVDPDAVM DGVARAMRVA
ISREEEKLET ALPFLATVGS TSPYIGLFGT VWGIMNSFRG LAQVQQATLA TVAPGIAEAL
IATAIGLFAA IPAVIAYNRF SARGEMLIGR YYTFADEFQA ILHRKVHTSE D
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