| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1272 |
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| Symbol | ruvB |
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| ID | 5109088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1432973 |
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| End bp | 1434025 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640502497 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_001186769 |
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| Protein GI | 146306304 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.197391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.338771 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAG CCGATCGCCT GATTACCGCC AGCCCGCGCG AGCGCGAAGA ACAGCAGGAT
CGTGCCATCC GTCCGCTGAA GCTGGCCGAC TACATTGGCC AGCCCGGCGT GCGCGAGCAG
ATGGAGCTGT TCATCCAGGC TGCTCGTGGC CGGGCGGAGT CGCTCGATCA CACCCTGATC
TTCGGTCCGC CCGGTCTGGG CAAGACCACC CTGGCCAATA TCATCGCCCA GGAAATGGGC
GTATCGATCA AGAGCACGTC CGGCCCTGTA TTGGAGCGTC CGGGCGATCT GGCTGCCCTG
TTGACCAATC TGGAAGCCGG GGACGTGCTG TTCGTCGACG AAATCCACCG TCTCTCGCCG
ATAGTCGAGG AGGTGCTGTA TCCGGCCATG GAGGACTTCC AGCTCGACAT CATGATCGGC
GAAGGCCCGG CGGCGCGCTC GATCAAGCTC GACTTGCCGC CCTTCACCCT GGTGGGCGCC
ACTACCCGCG CCGGCATGCT GACCAACCCG CTGCGCGACC GCTTCGGCAT CGTCCAGCGC
CTGGAGTTCT ACGGTATCGA CGACCTGGCT ACCATCGTCA CGCGATCTGC CGGCATTCTC
GGCCTGCCCA TCGAAGACCA GGGCGCTTAC GAGATCGCGC GTCGTGCACG CGGCACGCCG
CGTATCGCCA ACCGCCTGCT GCGCCGCGTG CGCGACTTCG CCGAAGTGCG CGGGCGTGGC
CACATCACCC GTGAGATCGC CGACCAGGCG CTCAACCTGC TGGATGTCGA TGAACGTGGC
TTCGACCACT CCGACCGTCG TCTGCTGTTG GCCATGATCG AGAAGTTCGA CGGTGGACCG
GTGGGCGTCG ACAGCCTGGC GGCCGCCATC AGCGAAGAGC GCCACACCAT TGAGGATGTG
CTCGAACCCT ATCTGATCCA GCAGGGCTAT ATGATGCGTA CGCCGCGCGG GCGGGTGGTG
ACCCGTCACG CCTATCTGCA CTTTGGCCTG AACACCCCGA AACGTCTCGG CGAGCAGCCG
AGCGGAGACT TGTTCGCAGT GAGCGACGAA TGA
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| Protein sequence | MIEADRLITA SPREREEQQD RAIRPLKLAD YIGQPGVREQ MELFIQAARG RAESLDHTLI
FGPPGLGKTT LANIIAQEMG VSIKSTSGPV LERPGDLAAL LTNLEAGDVL FVDEIHRLSP
IVEEVLYPAM EDFQLDIMIG EGPAARSIKL DLPPFTLVGA TTRAGMLTNP LRDRFGIVQR
LEFYGIDDLA TIVTRSAGIL GLPIEDQGAY EIARRARGTP RIANRLLRRV RDFAEVRGRG
HITREIADQA LNLLDVDERG FDHSDRRLLL AMIEKFDGGP VGVDSLAAAI SEERHTIEDV
LEPYLIQQGY MMRTPRGRVV TRHAYLHFGL NTPKRLGEQP SGDLFAVSDE
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