| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1271 |
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| Symbol | ruvA |
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| ID | 5109087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1432351 |
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| End bp | 1432959 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502496 |
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| Product | Holliday junction DNA helicase RuvA |
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| Protein accession | YP_001186768 |
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| Protein GI | 146306303 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
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| TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0682991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.630495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGTGATCG GACGTTTGCG CGGCACCCTG GCGGAAAAGC AGCCGCCGCA TTTGCTTCTG
GATGTAAATG GCGTCGGTTA TGAGCTGGAA GTGCCGATGA CCACCCTATA TCGTCTGCCT
GCGGTGGGGG AGACGCTGAC GCTGCACACC CATCAGGTGG TGCGCGAAGA CGCCCATCTG
CTCTACGGAT TTTTCGAGAA GCGCGAGCGC GAGCTGTTCC GCGAGCTGAT CCGCCTCAAT
GGCGTCGGCC CGAAGCTGGC GCTGGCCTTG ATGTCCGGAC TGGAGGTCGA CGAGCTGGTG
CGCTGCGTGC AAGCCCAGGA CACGGCGGCG CTGACCAAGG TGCCCGGCGT CGGCAAGAAG
ACCGCCGAGC GGCTGCTGGT GGAACTCAAG GACAGGTTCA AGGCCTGGGA GACCATGCCG
GCCATCGCCA CCCTGGTGGT TGAACCTCGC CTGGGGGCGA CAGTCTCAAG CGCGGAGAAC
GATGCGGTGA GCGCTCTGAT TTCCCTCGGC TACAAGCCGC AGGAGGCCAG CCGGGCCGTG
GCTGCCGTCA AGGAGGATGG CTTGAGTAGT GAAGATTTGA TTCGTCGCGC GTTGCGCGGC
ATGGCGTAG
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| Protein sequence | MVIGRLRGTL AEKQPPHLLL DVNGVGYELE VPMTTLYRLP AVGETLTLHT HQVVREDAHL
LYGFFEKRER ELFRELIRLN GVGPKLALAL MSGLEVDELV RCVQAQDTAA LTKVPGVGKK
TAERLLVELK DRFKAWETMP AIATLVVEPR LGATVSSAEN DAVSALISLG YKPQEASRAV
AAVKEDGLSS EDLIRRALRG MA
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