| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1268 |
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| Symbol | aspS |
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| ID | 5109084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1429024 |
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| End bp | 1430799 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502493 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_001186765 |
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| Protein GI | 146306300 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.132766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.965215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCA GCCACTATTG CGGCCAACTG AACGAGAGCC TGGATGGCCA GGAAATCACC
CTTTGCGGCT GGGTCCACCG TCGCCGTGAC CATGGTGGGG TGATCTTCCT CGATATTCGT
GATCGTGAAG GCCTGGCCCA GGTGGTGTTC GACCCGGATC GCGCGGAGAC CTTCGCCAAG
GCCGACCGCG TGCGCAGCGA ATACGTGGTG AAGATCACCG GCAAGGTGCG TCTGCGTCCG
GCCGGTGCGG TCAATCCGAA CATGGCTTCC GGCGCCATCG AAGTGCTGGG CTACGAGCTG
GACGTGCTCA ACGAGGCGGA AACCCCGCCG TTCCCGCTCA ACGAATACAC CGACGTCGGC
GAGGAAACCC GCCTGCGCTA CCGTTTCATC GACCTGCGTC GTCCGGAGAT GGCCGAGAAG
CTCAAGCTGC GCTCGCGCAT CACCTCGAGC ATTCGCCGCT ACCTGGACGA CAACGGCTTC
CTCGACGTCG AGACGCCGAT CCTGACCCGC GCCACCCCGG AAGGTGCGCG GGACTATTTG
GTGCCGAGCC GCACCCACGC CGGCAGCTTC TTCGCCCTGC CGCAGTCGCC GCAGTTGTTC
AAGCAGCTGC TGATGGTTGC CGGCTTCGAC CGCTACTACC AGATCGCCAA GTGCTTCCGC
GACGAGGACC TGCGTGCCGA CCGTCAGCCG GAATTCACCC AGATCGACAT CGAGACCAGC
TTCCTCGATG AAAAAGACAT CATGGACATC ACCGAGACCA TGGTGCGCAA CCTGTTCAAG
GAAGTGCTGG GTGTCGAGTT CGGCGAACTG CCGCACATGC CGCTGGCCGA AGCCATGCGC
CGTTTCGGTT CGGACAAGCC GGACCTGCGC ATCCCGCTGG AGCTGGTGGA CGTCGAGGAC
CAGCTCAAGG ACGTCGAATT CAAGGTCTTC GCAGGTCCCG CCAACGACCC GAAATGCCGC
GTTACCGCGC TGCGCGTACC GGGCGGGGCG AGCATGCCGC GCAAGCAGAT CGACGACTAC
ACCAAGTTCG TCGGCATCTA CGGCGCCAAG GGCCTGGCCT ATATCAAGGT CAACGAGCGC
GCTGCCGGCG TTGACGGCCT GCAGTCGCCG ATCGTCAAGA ACATCCCGCT GGACAACATC
AATGTCATCC TCGACCGCGT TGGCGCCGTC GATGGCGATA TCGTGTTCTT CGGCGCGGAC
AAGGCCAAGA TCGTCAGCGA AGCCCTGGGC GCGCTGCGCA TCAAGCTGGG TCATGACCTG
AACCTGCTGA CCTGCGAGTG GGCGCCGCTG TGGGTCGTCG ACTTCCCGAT GTTCGAGGAG
AACGACGATG GCAGCCTGAC CGCCATGCAC CACCCCTTCA CCTCGCCCAA GTGCACCCCC
GAGGATCTGG AGGCCAACCC GGCTGCCGCG CTGTCGCGCG CCTACGACAT GGTGCTCAAC
GGCACCGAAC TGGGTGGCGG TTCGATCCGT ATCCACGACA AGGCCATGCA GCAGACCGTG
TTCCGCGTGC TCGGCATCAG CGAAGACGAG CAGCAGGAAA AGTTCGGCTT CCTGCTGGAT
GCGCTCAAGT ACGGTGCGCC GCCCCACGGT GGTCTGGCCT TCGGCCTGGA TCGCCTGGTA
ATGCTGATGA CCGGCGCCAG CTCGATCCGC GAAGTGATCG CCTTCCCGAA AACCCAGAGC
GCGGCCTGCG TCATGACCCA GGCGCCGGGT GTGGTGGATG CCAAGTCGCT GCGCGAGCTG
CATATCCGCC TGCGTGAGCA AGCCAAGGCC GAATAA
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| Protein sequence | MMRSHYCGQL NESLDGQEIT LCGWVHRRRD HGGVIFLDIR DREGLAQVVF DPDRAETFAK
ADRVRSEYVV KITGKVRLRP AGAVNPNMAS GAIEVLGYEL DVLNEAETPP FPLNEYTDVG
EETRLRYRFI DLRRPEMAEK LKLRSRITSS IRRYLDDNGF LDVETPILTR ATPEGARDYL
VPSRTHAGSF FALPQSPQLF KQLLMVAGFD RYYQIAKCFR DEDLRADRQP EFTQIDIETS
FLDEKDIMDI TETMVRNLFK EVLGVEFGEL PHMPLAEAMR RFGSDKPDLR IPLELVDVED
QLKDVEFKVF AGPANDPKCR VTALRVPGGA SMPRKQIDDY TKFVGIYGAK GLAYIKVNER
AAGVDGLQSP IVKNIPLDNI NVILDRVGAV DGDIVFFGAD KAKIVSEALG ALRIKLGHDL
NLLTCEWAPL WVVDFPMFEE NDDGSLTAMH HPFTSPKCTP EDLEANPAAA LSRAYDMVLN
GTELGGGSIR IHDKAMQQTV FRVLGISEDE QQEKFGFLLD ALKYGAPPHG GLAFGLDRLV
MLMTGASSIR EVIAFPKTQS AACVMTQAPG VVDAKSLREL HIRLREQAKA E
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