| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1263 |
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| Symbol | |
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| ID | 5109079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1424258 |
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| End bp | 1424875 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502488 |
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| Product | cold-shock DNA-binding protein family protein |
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| Protein accession | YP_001186760 |
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| Protein GI | 146306295 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.18948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAAGA TTGCCCATCT CGTGACAGGG TTCGCCGCCC TGCTGCTGTC TGCCGTACCC
GTTTTTTCTG CCTCGTTCCT GACCACTCCG GATGCCATCT ATCTGGCCCT CATCGGCCTG
CTCAACCTGC TGATCGCCAC GCAACAACCC TCATACTTCG GCGGCCTGCG CCAACAGCTG
CAGGGCCTGG CCTCCGCCCT GCTGGTCCTG GCTGCCGTCG TGCAGAGCCT GGTACTGCTG
GCTCCACTGC CGAGCATCGG CGACCAACCG GCTGTCTGGC TTACCCTGCT GATCACCAGC
GCCGCCGTTC TGCTGCAACT GGCAGCCCAG GTACGCCCGT CCCTGCCGCA AAGCGCCCAG
CGCAGCACCG AGCAATCGAG CGGCGCCAGC TCCCAGGAGT CGCGTGAGAC CGGCACGGTC
AAGTGGTTCA ACACCTCCAA GGGTTTCGGT TTCATTTCTC GCGACTCGGG GGAGGATATC
TTCGTGCATT TCCGTGCCAT TCGCGGCGAA GGCCACCGGG TGCTGATAGA AGGCCAGCGC
GTGGAGTTCT CGGTCATGCA GCGCGACAAG GGTCTGCAGG CGGAAGACGT GATTGCCGCA
GCACCTTCGC GGCGCTGA
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| Protein sequence | MLKIAHLVTG FAALLLSAVP VFSASFLTTP DAIYLALIGL LNLLIATQQP SYFGGLRQQL
QGLASALLVL AAVVQSLVLL APLPSIGDQP AVWLTLLITS AAVLLQLAAQ VRPSLPQSAQ
RSTEQSSGAS SQESRETGTV KWFNTSKGFG FISRDSGEDI FVHFRAIRGE GHRVLIEGQR
VEFSVMQRDK GLQAEDVIAA APSRR
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