Gene Pmen_1256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1256 
Symbol 
ID5109072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1417485 
End bp1418306 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content67% 
IMG OID640502481 
Productaldo/keto reductase 
Protein accessionYP_001186753 
Protein GI146306288 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.332065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACAA TTGAATTGGC CGGCGTACAG GTGCCGGTGG TCGGTCAGGG TACCTGGCGC 
ATGGGCGAGG ACCACCGGCA GCGCACGCGG GAAGTCGCCG CGCTGCGTGA AGGGCTGGAT
CTGGGCCTGA GCCTGATCGA CACCGCCGAG ATGTATGGCG AGGGTGGTGC GGAGCAGGTG
GTGGGCGAGG CCATTGCCGG TCGCCGCGAT GAGGTCTTTC TGGTCAGCAA GGTGTACCCG
CACAACGCCA GTCAGGACGG CGTTCAGGCG GCCTGTGAGC GCAGTCTGAA GCGTTTGGGA
TGCGAGCGGA TCGATCTGTA CCTGCTGCAC TGGCGCGGGC GCTATCCGCT GCGGGAGACC
GTCGAAGGCT TCGAGCGGCT GCGCGAGCAG GGCAAGATCG GCGCCTGGGG TGTTTCCAAC
TTCGACCTGG ACGACCTGCT GGAACTGGAT CAGCCGGCCT GCAGGACCAA TCAGGTGCTG
TACAACCTGC AGGCCCGCGG AGTCGAGTAC GACCTGCTGC CCTGGCAACA GCAGGCTGGC
ATGCCGTTGA TGGCCTACTG TCCGTTGAGC CAGGCGGGCG CCTTGCTGCA TGAGCCTGCG
CTGCGCGAGG TGGCCGAACG GCACGGGGTG ACGCCGGGCC AGGTGGCCCT GGCCTGGAGC
ATCAGACGGG ACGGTGTGAT TGCCATACCC AAGGCCGTGG GCAGCGCGCA TCTGCGCGAT
AACGCCGCTG CGGCATCGCT GGCGCTGCAT GCGGACGATC TGGCCCTGCT CGACGCGGCC
TTCCCGCCAC CGCGACGCAA GCAAGCCTTG CAGATGGTAT AG
 
Protein sequence
MRTIELAGVQ VPVVGQGTWR MGEDHRQRTR EVAALREGLD LGLSLIDTAE MYGEGGAEQV 
VGEAIAGRRD EVFLVSKVYP HNASQDGVQA ACERSLKRLG CERIDLYLLH WRGRYPLRET
VEGFERLREQ GKIGAWGVSN FDLDDLLELD QPACRTNQVL YNLQARGVEY DLLPWQQQAG
MPLMAYCPLS QAGALLHEPA LREVAERHGV TPGQVALAWS IRRDGVIAIP KAVGSAHLRD
NAAAASLALH ADDLALLDAA FPPPRRKQAL QMV