Gene Pmen_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1247 
Symbol 
ID5109063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1406670 
End bp1407002 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content65% 
IMG OID640502472 
Producthypothetical protein 
Protein accessionYP_001186744 
Protein GI146306279 
COG category[S] Function unknown 
COG ID[COG1742] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.288271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGTT ATCTGTGGTT TCTGCTGGCG GCCGTGTTCG AGATCGCGGG TTGCTACGCC 
TTCTGGATGT GGCTGCGGCT CGATCGCAGC GCCTGGTGGA TCGCGCCGGG CCTGCTCAGT
CTGGTTCTGT TCGCGCTGAT CCTGACGCGA GTGGAGGCCT CTTTCGCCGG GCGTGCATAC
GCGGCCTACG GTGGTGTGTA TATCGTCGCC TCGCTGGCCT GGCTGGCGCT GATCGAGAAG
ACCCGTCCCA TGCTCAGCGA CTGGCTGGGC GCGGCGCTGT GTCTGGCGGG TGCGGCCATC
ATCCTTTTCG CGCCACGCCT GCATACGTCC TGA
 
Protein sequence
MTSYLWFLLA AVFEIAGCYA FWMWLRLDRS AWWIAPGLLS LVLFALILTR VEASFAGRAY 
AAYGGVYIVA SLAWLALIEK TRPMLSDWLG AALCLAGAAI ILFAPRLHTS