Gene Pmen_1241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1241 
Symbol 
ID5108742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1402543 
End bp1403031 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content65% 
IMG OID640502466 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001186738 
Protein GI146306273 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.595226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAGC TGAGCCTGCG CCCCGCGCAA CCCGCCGATA TTTCACTGAT TCTCGACTTC 
ATCCAGGAAC TGGCCGAGTA TGAGCGCCTC AGCGATCAGG TGGTTGCCGA CCCGCTGCTG
ATGACCGAGC ATCTCTTCGG CCCTCGCCCA TTCGCCGAAG TGCTGATCGG TGAGGTGGAC
GGCGAAGCCG CCGGTTTCGC CCTGTTCTTC CACAACTACT CCACCTTCCT CGGCCGCCCC
GGCATCTATC TGGAAGACCT CTACGTGCGC CCCGCTGCCC GCGGCGCCGG CCTCGGCAAA
GCGCTGCTGA GCGAACTGGC GCGCCTGGCG GTCAGTCGCG GCTGTGGCCG TCTGGAGTGG
TCTGTGCTGG ACTGGAACCA ACCGGCCATC GGCTTCTATG AAAGCCTGGG AGCCACGGCG
CAGGACGAAT GGACCGTCTA CCGCCTGAGC GGAACCGCGC TCAAGGCGCT GGCCGATCAA
ACGCGCTGA
 
Protein sequence
MSKLSLRPAQ PADISLILDF IQELAEYERL SDQVVADPLL MTEHLFGPRP FAEVLIGEVD 
GEAAGFALFF HNYSTFLGRP GIYLEDLYVR PAARGAGLGK ALLSELARLA VSRGCGRLEW
SVLDWNQPAI GFYESLGATA QDEWTVYRLS GTALKALADQ TR