Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1241 |
Symbol | |
ID | 5108742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1402543 |
End bp | 1403031 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640502466 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001186738 |
Protein GI | 146306273 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.595226 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAGC TGAGCCTGCG CCCCGCGCAA CCCGCCGATA TTTCACTGAT TCTCGACTTC ATCCAGGAAC TGGCCGAGTA TGAGCGCCTC AGCGATCAGG TGGTTGCCGA CCCGCTGCTG ATGACCGAGC ATCTCTTCGG CCCTCGCCCA TTCGCCGAAG TGCTGATCGG TGAGGTGGAC GGCGAAGCCG CCGGTTTCGC CCTGTTCTTC CACAACTACT CCACCTTCCT CGGCCGCCCC GGCATCTATC TGGAAGACCT CTACGTGCGC CCCGCTGCCC GCGGCGCCGG CCTCGGCAAA GCGCTGCTGA GCGAACTGGC GCGCCTGGCG GTCAGTCGCG GCTGTGGCCG TCTGGAGTGG TCTGTGCTGG ACTGGAACCA ACCGGCCATC GGCTTCTATG AAAGCCTGGG AGCCACGGCG CAGGACGAAT GGACCGTCTA CCGCCTGAGC GGAACCGCGC TCAAGGCGCT GGCCGATCAA ACGCGCTGA
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Protein sequence | MSKLSLRPAQ PADISLILDF IQELAEYERL SDQVVADPLL MTEHLFGPRP FAEVLIGEVD GEAAGFALFF HNYSTFLGRP GIYLEDLYVR PAARGAGLGK ALLSELARLA VSRGCGRLEW SVLDWNQPAI GFYESLGATA QDEWTVYRLS GTALKALADQ TR
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