| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1236 |
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| Symbol | |
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| ID | 5108737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1397184 |
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| End bp | 1398116 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502461 |
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| Product | lipid A biosynthesis lauroyl acyltransferase |
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| Protein accession | YP_001186733 |
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| Protein GI | 146306268 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
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| TIGRFAM ID | [TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.582676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGCC CACGCTTTCG CGCCTATTTC CTTCATCCGC GCTTCTGGCC GCTATGGCTC
GGCTTCGGGC TGTTGTGGCT GGTGGTGCAG TTGCCCTACG GCCTGCAACT CAAGCTGGGG
CGTGCGCTGG GCTGGCTGAT GTATCGCACG GCCGGCTCGC GCCGGCGCAT CGCGGCGCGC
AATCTCGAGC TGTGCTTCCC GGCCAAGAGC GCGGCCGAGC GCGAGCGCCT GCTCAGGGAG
AACTTCGCCT CCACCGGTAT CGCCTTCTTC GAAATGGCCA TGAGCTGGTG GTGGCCCAAG
GCGCGCCTGG CAAAGCTGGC CCATGTCGAG GGCCTCGAGC ATCTGCAGCA GGCGCAGGCC
GAAGGGCAGG GCGTGATCCT CATGGCGGTG CACTTCACCA CCCTGGAGAT CGGCGCGGCG
CTGCTCGGCC AGTTGCACAC CATCGACGGC ATGTACCGCG AGCACAAGAA CCCGCTGTTC
GACTTCATCC AGCGTCGGGG GCGCGAGCGG CACAATCTGG ATGCCACCGC CATCGAGCGC
GAGGACATTC GCGCCATGCT CAAGGTGCTG CGCGCCGGTC GAGCCATCTG GTACGCGCCG
GATCAGGACT ACGGGCGCAA GCAGAGCATC TTCGTGCCCC TGTTCGGCAT TCCTGCCGCG
ACCGTCACTG CCACCACCAA GTTCGCTCGT CTGGGCAAGG CGCGCGTGGT GCCCTTCACC
CAGCAGCGTC TGGCCGATGG CAGCGGCTAT CGGCTGGTGA TCCATCCGCC GCTGGCGGAC
TTCCCGGGGG AGAGCGAAGA GGCCGATTGC CTGCGCATCA ACCAGTGGAT CGAGCAGGTC
GTCAGCGCCT GCCCGGAGCA GTACCTGTGG GCTCACCGCC GCTTCAAGAC GCGCCCCGAG
GGTGAGCCGA AGCTGTACGG GAAGCGCAAG TAG
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| Protein sequence | MDRPRFRAYF LHPRFWPLWL GFGLLWLVVQ LPYGLQLKLG RALGWLMYRT AGSRRRIAAR
NLELCFPAKS AAERERLLRE NFASTGIAFF EMAMSWWWPK ARLAKLAHVE GLEHLQQAQA
EGQGVILMAV HFTTLEIGAA LLGQLHTIDG MYREHKNPLF DFIQRRGRER HNLDATAIER
EDIRAMLKVL RAGRAIWYAP DQDYGRKQSI FVPLFGIPAA TVTATTKFAR LGKARVVPFT
QQRLADGSGY RLVIHPPLAD FPGESEEADC LRINQWIEQV VSACPEQYLW AHRRFKTRPE
GEPKLYGKRK
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