| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1220 |
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| Symbol | |
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| ID | 5108721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1381137 |
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| End bp | 1382066 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502445 |
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| Product | ABC transporter related |
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| Protein accession | YP_001186717 |
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| Protein GI | 146306252 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.00788547 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGCAGTCGG TCATCTCCAT TTCGCAACTG AACAAGACCT ACGCGTCGGG CCATCCGGCC
CTGCAAGGCA TCGACCTGGA CATTCGCCAG GGCGAGATCT TCGCCTTGCT CGGGCCCAAC
GGCGCCGGCA AGACCACGCT GATCAGCATC ATCTGCGGCA TCGTCAATCC GGGCGAGGGC
AGGGTACTGG TCGGCGGCAA GGACATCGTC CGCGACTACC GCGCGGCCCG CTCGCAGATC
GGCCTGGTGC CGCAGGAGCT GGTCAGCGAC GTGTTCGAAA CCGTCTGGGC GACGGTCAAG
TTCAGCCGCG GCCTGTTCGG CAAGAAGCCC GATCCGGCCT ATCTCGAGCA GCTGCTCAAG
GACCTGTCGC TGTGGGACAA GCGCAACGCC AAGATCATGG AGCTGTCCGG CGGCATGAAG
CGCCGGGTGA TGATTGCCAA GGCGCTGTCG CACGAGCCGC AGATTCTCTT TCTCGACGAG
CCTACCGCCG GTGTCGACGT CGAGCTGCGT CGCGACATGT GGAACATGGT GCGGCGTCTG
CGCGAGCGCG GCGTGACCAT CATCCTCACC ACCCACTACA TCGAAGAGGC CGAGGAAATG
GCCGACCGCA TCGGGGTGAT CAGCAAGGGG CGGATCATTC TGGTGGAGGA CAAGCAGGTG
CTGATGCACA AGCTGGGCAA GAAGCAGCTG ACCCTGCACC TGCAGCAGCC GTTGTCCTGC
GTGCCGGCCG AGCTCGCGCG CTACGGCCTG GAGCTGACCG ATCAGGGCCA TGCCCTGGTG
TTCACCTTCG ATGCGCAGCA CGAGAACACC GGCATCGCCG AACTGCTGCG CGATCTGACC
CAGCACGGCA TCGACTTCAA GGATCTGCAG TCGAGCCAGA GTTCCCTGGA AGAAATCTTC
GTCGGCCTGA TCAAGGAGTC GCGCACATGA
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| Protein sequence | MQSVISISQL NKTYASGHPA LQGIDLDIRQ GEIFALLGPN GAGKTTLISI ICGIVNPGEG
RVLVGGKDIV RDYRAARSQI GLVPQELVSD VFETVWATVK FSRGLFGKKP DPAYLEQLLK
DLSLWDKRNA KIMELSGGMK RRVMIAKALS HEPQILFLDE PTAGVDVELR RDMWNMVRRL
RERGVTIILT THYIEEAEEM ADRIGVISKG RIILVEDKQV LMHKLGKKQL TLHLQQPLSC
VPAELARYGL ELTDQGHALV FTFDAQHENT GIAELLRDLT QHGIDFKDLQ SSQSSLEEIF
VGLIKESRT
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