| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1200 |
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| Symbol | |
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| ID | 5108701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1355691 |
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| End bp | 1358180 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502425 |
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| Product | ATP-dependent protease-like protein |
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| Protein accession | YP_001186697 |
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| Protein GI | 146306232 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000280038 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGACT CCGTTGCTGC CAGTCTGCGG CTAGCCCCCG ACTCCCTGAC CCGCCCCTTC
GCCCCCGAAC AGTTCAACTT CAGCAGTACC GATGATCTGG AACCCTTCCG CGGCGTGCTC
GGCCAGGCCC GTGCGGTGGA GGCCCTGCAG TTCGGCGTGG CCATGCCGCG CGCCGGCTAC
AACGTGTTCG TCATGGGTGA GCCGGGTACC GGGCGTTTCT CCTTCGTGCA GCGCTACCTC
AAGGCCGAGG CCAAGCGCAT GGAGACTCCG GCAGACCGCG TCTACGTCAA CAATTTCGAC
GAGCCGCGCG AGCCGCGTGC GCTGGAATTG CCGGCCGGCA CTGCGAGCGC CTTCATCGCC
GACATCAACC AGCTGATCGA CAACCTGCTG GCCACCTTCC CGGCAGTGTT CGAAACACCC
ACCTACCAGC AGAAGAAGAG CGCCATCGAC CGCTCCTTCA ACAAGCGCTA CGACCAGGCG
CTGGACGTGA TCGAGAAGCT CTCGCTGGAG AAGGGCGTGG CCCTGTACCG CGACAGCACC
AATATCGCCT TCACCCCGAT GGCAGACGGC AAGGCGCTGG ACGAGGCCGA GTTCGCCCAG
CTGCCAGAGG CCGATCGCGA GCGTTTCCAT GCCGATATCG CCCTGCTCGA GGAGCGCCTG
AACGAGGAGC TGGCCAGCCT GCCGCAGTGG AAGCGCGAGT CGAGCAACCT GCTGCGTCAG
CTCAACGAAG AGACCATCAC CGTCGCCCTG CAGCCGCTGC TGGCGCCGCT GTCGGAGAAG
TACGCCGAGA ACGCCGGCGT CTGCGCCTAC CTGCAGGCCA TGCAGATCAA CCTGCTGAAG
ACCGCGGTGG AGCAGCTAGT GGATGTGGAC AAGGCCGACC CGCAGCTGCG CAAGCTGCTG
GAGGAAATGT ACTGCCCGAG CCTGGTGGTC GGTCATCACG CCCAGGGCGG CGCCCCGGTG
GTGTTCGAGT CGCACCCGAC CTACGACAAC CTGTTCGGCC GCATCGAATA CAGCTCCGAT
CAGGGCGCCC TGTACACCAG CTATCGCCAG CTGCGCCCGG GGGCGCTGCA CCGTGCCAAC
GGCGGCTACC TGGTGGTCGA GGCGGAGAAG CTGCTCGGTG AGCCCTTCGT CTGGGAGGCG
CTCAAGCGCG CCCTGCATTC GCGCCAGCTG AAAATGGAAT CGCCGCTGGG CGATCTGGGG
CGCATCGCCA CCGTGACCCT CAATCCGCAG ATGATTCCCT TGCAGCTCAA GGTGGTGATC
ATCGGCTCGC GCCAGCTCTA CTACGCGCTG CAGGATCACG ATCCGGACTT CCAGGAGATG
TTCCGTGTGC TGGTCGACTT CGACGAGGAC ATTCCCCTTG CCGAAGACAG CCTGGAGCAG
TTCGCCCAAC TGATGAAGAC GCGCACCTCG GAAGAGGGCA TGGCGCCGCT GACCGGCGCC
GCCGTGGCGC GTCTGGCCAC CTACAGCGCG CGCCTGGCCG AGCACCAGGG GCGTCTGTCG
GCGCGCATCG GCGACCTCTT CCAGCTGGTC AGCGAGGCCG ATTTCATCCG CCATCTGGCC
GGTGAAAGCA TCACCGACGT CGGTCATATC GAGCGTGCGC TGAAGGCCAA GGCCACCCGC
ACCGGGCGCG TTTCGGCGCG CATCATCGAC GACATGCTGG CCGGCATCAT CCTTATCGAC
ACCAGCGGCG CTGCCGTCGG CAAGTGCAAT GGCCTGACCG TGCTGGAAGT GGGCGACTCG
GCCTTCGGCG TGCCGGCGCG GATTTCCGCC ACCGTCTACC CGGGCGGCAG CGGCATCGTC
GACATCGAGC GCGAAGTCAG CCTGGGGCAG CCGATCCACT CCAAGGGCGT GATGATCCTC
ACCGGTTTCC TCGGCAGCCG CTACGCCCAG GAGTTCCCCC TAGAGATCTC CGCCAGCATC
GCCCTGGAGC AGTCCTACGG CTACGTCGAT GGCGACAGCG CCTCGCTGGG CGAGGTGTGC
ACGCTGATTT CGGCGCTGTC GCGCACGCCG CTCAAACAGT GCTTCGCCAT CACCGGTTCG
ATCAACCAGT TCGGCGAAGT GCAGGCGGTC GGCGGGGTCA ACGAGAAGAT CGAAGGCTTC
TTCCGGCTGT GCGAGGCGCG CGGTCTGACC GGCGAGCAGG GGGTGATCAT TCCGCATTCC
AACGTCAGCA ACCTGATGCT CGACGAGCGG GTGCTCGACG CCGTGCGCGC CGGCCAGTTC
AACGTCTACG CCGTGCGCCA TGTCGACGAG GCGCTAAGCC TGCTGGTGGG CGAACCGGCG
GGGCATCCCG ACGAGAAGGG CCGCTTCCCC AAGGGCAGCG TCAATGCGCG TGTGCTGGAG
CGGCTGCGCG AGATCGCCGA GATCGGTATG GAGGAGGAGG GCAAGCACCT CGAACCGGCC
AAGGAAAAGA GCGCAGCCGT TGAGGAGGCA GCCAAACCGG CCAAGGCACC TCGGCGCAAG
AAGGGCGAAG GCGAGGGTGC CGCGGGCTGA
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| Protein sequence | MPDSVAASLR LAPDSLTRPF APEQFNFSST DDLEPFRGVL GQARAVEALQ FGVAMPRAGY
NVFVMGEPGT GRFSFVQRYL KAEAKRMETP ADRVYVNNFD EPREPRALEL PAGTASAFIA
DINQLIDNLL ATFPAVFETP TYQQKKSAID RSFNKRYDQA LDVIEKLSLE KGVALYRDST
NIAFTPMADG KALDEAEFAQ LPEADRERFH ADIALLEERL NEELASLPQW KRESSNLLRQ
LNEETITVAL QPLLAPLSEK YAENAGVCAY LQAMQINLLK TAVEQLVDVD KADPQLRKLL
EEMYCPSLVV GHHAQGGAPV VFESHPTYDN LFGRIEYSSD QGALYTSYRQ LRPGALHRAN
GGYLVVEAEK LLGEPFVWEA LKRALHSRQL KMESPLGDLG RIATVTLNPQ MIPLQLKVVI
IGSRQLYYAL QDHDPDFQEM FRVLVDFDED IPLAEDSLEQ FAQLMKTRTS EEGMAPLTGA
AVARLATYSA RLAEHQGRLS ARIGDLFQLV SEADFIRHLA GESITDVGHI ERALKAKATR
TGRVSARIID DMLAGIILID TSGAAVGKCN GLTVLEVGDS AFGVPARISA TVYPGGSGIV
DIEREVSLGQ PIHSKGVMIL TGFLGSRYAQ EFPLEISASI ALEQSYGYVD GDSASLGEVC
TLISALSRTP LKQCFAITGS INQFGEVQAV GGVNEKIEGF FRLCEARGLT GEQGVIIPHS
NVSNLMLDER VLDAVRAGQF NVYAVRHVDE ALSLLVGEPA GHPDEKGRFP KGSVNARVLE
RLREIAEIGM EEEGKHLEPA KEKSAAVEEA AKPAKAPRRK KGEGEGAAG
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