| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1188 |
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| Symbol | |
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| ID | 5108689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1339379 |
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| End bp | 1340638 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640502410 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001186685 |
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| Protein GI | 146306220 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGCCG CAACAACGCG CCTTTCAGAC CTGAAGGTCA AAGCAGCAAA GCCCAAAGAA
AAGGACTACA CCTTGACTGA CGGCAACGGC CTTCAGATGC GAGTGAGAAT CAATGGATCG
AGATTGTGGA ATTTCAACTA CATCCACCCC ATCACCAAGA AGCGACTGAA TATGGGGCTT
GGCACCTTCC CGGAAGTAAG CCTTGCTCAA GCCCGCAAAC TGACCATTGA AGCGCGTGAG
CTCGTAGCAC AGGGCATTGA TCCCAAAGAG AGACGCGACG CAGATCGACA GGCCAAAAAG
GCCGCAACCG AGCACACGCT GCAGAACGTA GCGACGTCCT GGTATGAACT CAAGAAAGAT
GCAGTAACCC CCGCCTACGC TGAAGACATT TGGCGCTCGC TTACGTTGCA CGTCTTCCCC
GACTTGGGCG TTACGCCGAT CGCATCCATA ACAGCTCCGA AAGTCATCAG CCTTCTCAAG
CCGCTCGAAA CTAAAGGCAG CCTGGAAACC GTCAAACGCC TTACGCAGCG ACTCAACGAA
ATCATGACCT ACGGGGTCAA CTCAGGCCTG ATACCCGCCA ACCCACTTAC CGGGATTGGT
AGCGTGTTCA AGAAGCCGAA GAAAAAGAAC ATGCCGGCCT TACATCCCGA TGAGCTCAAA
GAGCTCATGG TTGCAATCGC GAACGCCAGC ATAAAAAGAA CCACTCGATG CCTGATCGAG
TGGCAACTGC ACACGATGAC TCGCCCCGTT GAGGCTGCCA CTACCCGCTG GGCCGATATC
GACTTCGAGA AAAGGATCTG GACGATCCCG GCTGAACGCA TGAAGAAACG TCGCCCGCAT
ACGGTGCCGC TTACAGATCA AGCATTGGCC ATTCTGGAAG CAATCAAACC CTACAGCGGG
CACCGTGAAT ACGTGTTCCC TGCTGACCGC AATCCGCGTA CTCACTGCAA TAGCCAAACA
GCCAACATGG CCTTGAAACG CATGGGCTTT GAGGGACGCT TGGTAAGCCA CGGAATGCGA
TCAATGGCCA GTACAACGCT CAACGAGCAC GGCTGGGAGC CTGAGCTGAT CGAAGTAGCG
CTGGCGCATG TGGATAAGGA CGAAGTGCGC AGTGCCTACA ACCGTGCGGA CTATATCGAT
CGCAGGCGCC CTATGATGGC TTGGTGGAGT GAGCATATTC AAAAGGCTGC TACCGGCAAT
CTTTCGGCTG CAGCTATCAA TCAACTTGGT GATCGAAAAA TCATTCCAAT ACGCCGCTAA
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| Protein sequence | MGAATTRLSD LKVKAAKPKE KDYTLTDGNG LQMRVRINGS RLWNFNYIHP ITKKRLNMGL
GTFPEVSLAQ ARKLTIEARE LVAQGIDPKE RRDADRQAKK AATEHTLQNV ATSWYELKKD
AVTPAYAEDI WRSLTLHVFP DLGVTPIASI TAPKVISLLK PLETKGSLET VKRLTQRLNE
IMTYGVNSGL IPANPLTGIG SVFKKPKKKN MPALHPDELK ELMVAIANAS IKRTTRCLIE
WQLHTMTRPV EAATTRWADI DFEKRIWTIP AERMKKRRPH TVPLTDQALA ILEAIKPYSG
HREYVFPADR NPRTHCNSQT ANMALKRMGF EGRLVSHGMR SMASTTLNEH GWEPELIEVA
LAHVDKDEVR SAYNRADYID RRRPMMAWWS EHIQKAATGN LSAAAINQLG DRKIIPIRR
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