| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1175 |
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| Symbol | |
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| ID | 5108676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1323417 |
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| End bp | 1324667 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640502397 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001186672 |
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| Protein GI | 146306207 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCGAGGC GTTATTCGAG AGTTGCTGAG GCACTTTGCC TGGCTGTTGC CTGCTCAGTT
GTAGTGAATC ATGCCGTGGC ATCAACGCCG ATCACCCTGG GCGACGCATG GGGGCAGGCA
CTGCAGACCA ACCCGTCGCT GATGGCAGGT GATCGTAATG TCGGCATCGC AGAAGGTGAG
CGTCGCCAAG CCGGTGTGAT TCCCAATCCG GAGCTGTCTT GGGAGGTTGA GGACACCCGC
AGTGCTACGA GGACCACGAC GGTACAGATC AGCCAACCTA TCGAGCTGGG CGGCAAGCGC
GGCGCCCGGA TAGAAATGGC CGAACGCGGT ATCGACAGTG CTGCGGTCGG TCAGGAGCAG
CTGCGCAATG AGCTGCGTGC CGAGGTGGTC GGGGCTTTTC AAGGAGCCTT GTTGGCGAAG
ATGCGCCAAG AGTTGGCTGA GCAGTCACAA CGCCTGAGCG AACGCGGCGT GGCGGTCGTT
GATGCGCGCG TCAAGGCTGG CAAGGCCTCT GCCCTGGAGG CATCGCGCGC CCGGCTGCAG
TACGAAGAGG TTCGACTGGA GGCCGCGCGG GCTCGAGATC AGTACATCAA CGCCATGAAT
CAGTTGCTGG CCTTGATTGG GGGGGCATCC GCCAGTGGTG AGCCTAGCCT CAGTGGCGAT
GTTACCGATA TGCCCGCAAT ACCCTCTGAA GTCGCACTTC TGAGCCGTCT GGACAAAGTT
CCGCAGATGC GTCTTGCCAG GGTCGAGATC GACCGGCAAG AGGCCGGAAT CGCCGTTGAG
AAAAGCCGGC GGATTCCCGA TCTGACGGTC AGCCTCGGCA GCCAATACAG CAGTGAGGAT
CGTGAGCGCG TCAACCTTGT TGGTTTGTCC ATGCCTCTGC CTCTGTTCGA TCGCAACCAG
GGAAATGTTC TGGCCGCCTC GCGGCGGGCT GATCAGGCGC GCGACTTGCG AAATGCTGCC
GAGTTGCGCC TGCGCAGTGA GGTGCAGCAG GCCTATCAGC AATGGCGAAC GGCGCAGGGA
GCGATTAGCG GTTTCGAGGG GGGCCTGCTT GCGTCCGCGG ACACAGCTTT GGAAAGCACG
ACGCGTGGAT TTCAGATGGG CAAGTTCGGC TTTATCGATG TTCTCGATGC CCAGCGCACA
TTGATTGACG TTCGCTCCCG TTACCTGCAG GCACTCGGCG AAGCGCTCGA TGCCTGGGTT
CGCCTTGAGC GCATCTACGG CGACCTATCT GCCCAAGCCG ATAACTACTG A
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| Protein sequence | MSRRYSRVAE ALCLAVACSV VVNHAVASTP ITLGDAWGQA LQTNPSLMAG DRNVGIAEGE
RRQAGVIPNP ELSWEVEDTR SATRTTTVQI SQPIELGGKR GARIEMAERG IDSAAVGQEQ
LRNELRAEVV GAFQGALLAK MRQELAEQSQ RLSERGVAVV DARVKAGKAS ALEASRARLQ
YEEVRLEAAR ARDQYINAMN QLLALIGGAS ASGEPSLSGD VTDMPAIPSE VALLSRLDKV
PQMRLARVEI DRQEAGIAVE KSRRIPDLTV SLGSQYSSED RERVNLVGLS MPLPLFDRNQ
GNVLAASRRA DQARDLRNAA ELRLRSEVQQ AYQQWRTAQG AISGFEGGLL ASADTALEST
TRGFQMGKFG FIDVLDAQRT LIDVRSRYLQ ALGEALDAWV RLERIYGDLS AQADNY
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