| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1168 |
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| Symbol | |
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| ID | 5108670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1314978 |
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| End bp | 1316306 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640502391 |
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| Product | outer membrane porin |
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| Protein accession | YP_001186666 |
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| Protein GI | 146306201 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.012931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.278101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAT CCACCCTGGC ACTGGCCATC ACGGCGGCGG CACTCAGTCA GGCTGCTTCC
GCCGATTTTC TCGGAGACAG CAAGGCGACG CTCGATATGC GCAACCTCTA CTTCAATGAG
GATGTGCGTG ATCGCGACAT TCCATCTACT CAGGAGTGGG GGCAGGGATT CATCCTCAAC
TATCAGTCTG GCTTCACCGA AGGGACGGTC GGCCTGGGGA TTGATGCCAT TGGCCTGCTG
GGGGTACGCC TCGATGGCGG TGGCCGGTCG GGCAAGGCAG GTATTGATCG TAACCCTGGC
GCCCTGTTCC CGCTGGATAG CGATGGTTCT GCGGTCAGTG ACTATAGCAA GGCCGGTGTA
ACGGCCAAGG CACGTCTTTC CAAGACCGAG TTGCGCCTAG GCACTCTGCA GCCGAAGTTG
CCGGTGGTGA CTTTCAACGA TGGTCGCCTG TTGCCGCAGT TGTTCGAAGG TGGTCAGATC
GTCTCCAACG AGATCGAAGG GCTGACCTTG ACAGCCGGTC AGTTGGAGCA CGCAAAAGGT
CGGAGCTCGA CTGACTCACG TGGCTTGTCC ATCGCCGGAT CCAACAATGC AACCACTGGA
CAGTTCGTCA ATACGTTCTA TTTCGCGGGT GGCGACTACA AGGTCACCAA GGATCTCACC
GCTCAGTATT ACTTCGGCAA TCTGGAAGAT TTCTACAAGC AACATTTCCT GGGATTGATC
CACAACTACG CACTGGGCGG TGGCAATCTC AAGACCGACC TGCGTTACTT CTACAGCACC
TCCGATGGCA AGAACAGCAG TGAGAGCGGC CGGGCTGAGG GCTATCGCAG CAACGGTTAC
TGGACGGTCG GTGACAGCAA GCGTGGTGAG GTAGATAACC GTACCTGGAG TGCCTTGTTC
ACCTACAGCC ATAGCGGTCA TGAGCTGAGC GCGGGTTATC AGCAGGTGTC CGGCGATAGC
GCCTTCCCGT ACCTGAATGC TGGCGACGGG GCAACCAGTT ACCTGATCAC CGATCGGCAG
ATCGGTCGTG GTGGTAAATT CCTCAGTGCT GGCGAGCGCA CTTGGTTGGC CGGCTATGCC
TATGATTTTG GCAAGCTGGG TATCTCGGGG CTAAAAGCCT CGGTGATGTA TTTGTCGGGT
GATAACGTCG ACAGCGCACA GGGTGAGCGT AACGAATGGG AGCGTGACCT GCGCCTCGAT
TACGTTCTGC AGGAAGGATC ACTGAAGGGA CTCGGCTTCT CTCTGCGCAA TGCCAGTCTG
CGTGGCAATG TTGGGGCAGA CGTCGATGAG AATCGGCTTT ATGTGACGTA CAGCTTGCCA
CTGCTTTAA
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| Protein sequence | MKRSTLALAI TAAALSQAAS ADFLGDSKAT LDMRNLYFNE DVRDRDIPST QEWGQGFILN
YQSGFTEGTV GLGIDAIGLL GVRLDGGGRS GKAGIDRNPG ALFPLDSDGS AVSDYSKAGV
TAKARLSKTE LRLGTLQPKL PVVTFNDGRL LPQLFEGGQI VSNEIEGLTL TAGQLEHAKG
RSSTDSRGLS IAGSNNATTG QFVNTFYFAG GDYKVTKDLT AQYYFGNLED FYKQHFLGLI
HNYALGGGNL KTDLRYFYST SDGKNSSESG RAEGYRSNGY WTVGDSKRGE VDNRTWSALF
TYSHSGHELS AGYQQVSGDS AFPYLNAGDG ATSYLITDRQ IGRGGKFLSA GERTWLAGYA
YDFGKLGISG LKASVMYLSG DNVDSAQGER NEWERDLRLD YVLQEGSLKG LGFSLRNASL
RGNVGADVDE NRLYVTYSLP LL
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