| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1151 |
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| Symbol | |
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| ID | 5108124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1296950 |
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| End bp | 1297858 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502375 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001186650 |
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| Protein GI | 146306185 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.125531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.687942 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCAA ACGCAGTCTT CGCCAAAGCC TCACCGCTGG ATGCCCTGCA GCGCTGGCTG
CCCAAGCTGG TGCTGGCGCC GAGCATGGTC ATCGTGCTGG TGGGCTTCTA CGGCTACATC
GGCTGGACCT TCCTGCTCTC GTTCACCAAC TCGCGCTTCA TGCCCAGCTA CAACTTCGTT
GGGCTGCAGC AGTACGCGCG GCTGTGGGAC AACGACCGCT GGTGGGTGGC GAGCCAGAAC
CTGCTGGTGT TCGGCGGTCT GTTCATCGCC ATCAGCCTGG CCATCGGCGT GCTGCTGGCG
GTGCTGCTGG ATCAGCGCAT CCGCCGCGAA GGCTTCATTC GCACCATCTT TCTCTACCCC
ATGGCGCTGT CGATGATCGT CACCGGCACC GCCTGGAAGT GGCTGCTCAA CCCCGGCCTG
GGTCTGGACA AGCTGCTGCG TGACTGGGGC TGGGAAGGCT TTCGCTTCGA CTGGCTGGTG
GACCCGGATC GCGTCGTCTA CTGCCTGGTG ATGGCCGCCG TGTGGCAGTC ATCGGGCTTC
GTCATGGCGC TGTTTCTCGC CGGACTGCGT AGCGTCGATC AGTCGATCAT CCGCGCCGCC
CAGGTCGATG GCGCCAGCCT GCCGAGCATC TACCTGCGCA TCGTGCTGCC GAGCCTGGGC
CCGGTGTTCT TCAGCGCGCT GATGATCCTC GCCCATATCG CCATCAAGAG TTTCGACCTG
GTCGCCTCGA TGACCGCTGG CGGCCCCGGC TACGCCTCCG ACCTGCCGGC GATGTTCATG
TACGCCCACA CCTTTACCCG CGGCCAGATG GGCCTCGGCG CCGCCAGCGC GATGCTGATG
CTCGGCGCGG TGCTGGCGAT CCTGGTGCCG TATCTGTATT CCGAACTGCG AGGCAAACGC
CATGACTGA
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| Protein sequence | MSSNAVFAKA SPLDALQRWL PKLVLAPSMV IVLVGFYGYI GWTFLLSFTN SRFMPSYNFV
GLQQYARLWD NDRWWVASQN LLVFGGLFIA ISLAIGVLLA VLLDQRIRRE GFIRTIFLYP
MALSMIVTGT AWKWLLNPGL GLDKLLRDWG WEGFRFDWLV DPDRVVYCLV MAAVWQSSGF
VMALFLAGLR SVDQSIIRAA QVDGASLPSI YLRIVLPSLG PVFFSALMIL AHIAIKSFDL
VASMTAGGPG YASDLPAMFM YAHTFTRGQM GLGAASAMLM LGAVLAILVP YLYSELRGKR
HD
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