| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1104 |
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| Symbol | |
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| ID | 5108077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1240149 |
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| End bp | 1241549 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502328 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_001186603 |
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| Protein GI | 146306138 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.550844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0253682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCT ACGACGTGGT CATCATTGGT GCCGGCCCCG GCGGCTACAA CGCCGCCATC
CGCGCCGGTC AACTGGGCCT GAAGGTGGCC TGCGTGGAGG GCCGCGAGAC CCTTGGCGGC
ACCTGCCTGA ACGTCGGCTG CATGCCGTCC AAGGCCCTGC TGCATGCCTC CGAACTGTAC
GAGGCGGCGG CTGGCGGCGA GCTCAGCGCG CTGGGTGTGG AGGTCACGCC CTCGCTGAAT
CTGGCGCAGA TGATGAAGCA GAAGGCCGCC AGCGTCGAAG CGCTGACCAA GGGTGTGGAG
TTCCTGTTTC GCAAGAACAA GGTGGAGTGG GTCAAGGGCT GGGCGCGCAT CGACGGGCCG
GGGCGGGTGC AGGTCAAGCT GCACGAGGGC GGCGAGCGCC TGCTGGAGAC GCAGAACATC
GTCATCGCCA GCGGCTCGGA GCCGACCCCG CTGCCGGGAG TGGAGATCGA CAACGTGCGC
ATCCTCGATT CCACCGGCGC GCTGTCGCTG CCCGAGGTGC CCAGGCATCT GGTGGTGATC
GGTGCCGGGG TGATCGGCCT GGAGCTGGGT TCGGTGTGGC GCCGCCTGGG CAGCCAGGTC
ACCGTGGTGG AGTACCTCGA GCGCATCTGT CCCGGTCTGG ACGGCGAGAC CGCCAAGACC
CTGCAACGCA CGCTGGGCAA GCAGGGCATG AGCTTCAAGC TGGGTACCAA GGTCACCGGC
GCCAAGACGA GCAAGTCCGG TGTGACCCTG AGCCTGGAGC CGGCCGCAGG TGGGGCGAGC
GAGACCCTGG AGGCTGATTA CGTGCTGGTG GCCATCGGTC GGCGTCCCTA CACCAAAGGG
CTCGGGTTGG AGAGCGTCGG CCTGAGCACC GACAAGCGCG GCATGCTCGC TAATGAAAAG
CAGCACAGTG GCGTGTCCGG CGTGTGGGTG ATCGGCGACG TCACCTCCGG GCCGATGCTG
GCGCACAAGG CCGAGGACGA GGCGGTGGCC TGTATCGAGC GCATCGCCGG GCACGCCGCC
GAGGTCAACT ACGGGGTGAT CCCCGGGGTG ATCTACACCC GCCCGGAGGT GGCCAGCGTC
GGCAAGGGCG AGGAGGAGCT GAAGGCCGAA GGCCGCGCCT ACAAGGTGGG CAAGTTCCCC
TTCACGGCCA ACAGCCGGGC GAAGATCAAC CACGAGACCG AAGGCTTCGT GAAGATTCTC
GCCGACGCCA ATACCGACCA GATTCTCGGC GTGCACATGA TCGGCCCGAG CGTCGGCGAG
TTGATCGGCG AATACTGCGT GGCCATGGAG TTCTCCGCTT CGGCCGAGGA CATCGCGCTG
ACCTGCCATC CGCACCCGAC CCGCTCGGAG GCCGGACGTC AGGCGGCCAT GGGTGTGCAT
GGCTGGACCA TGCAGGCCTG A
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| Protein sequence | MSSYDVVIIG AGPGGYNAAI RAGQLGLKVA CVEGRETLGG TCLNVGCMPS KALLHASELY
EAAAGGELSA LGVEVTPSLN LAQMMKQKAA SVEALTKGVE FLFRKNKVEW VKGWARIDGP
GRVQVKLHEG GERLLETQNI VIASGSEPTP LPGVEIDNVR ILDSTGALSL PEVPRHLVVI
GAGVIGLELG SVWRRLGSQV TVVEYLERIC PGLDGETAKT LQRTLGKQGM SFKLGTKVTG
AKTSKSGVTL SLEPAAGGAS ETLEADYVLV AIGRRPYTKG LGLESVGLST DKRGMLANEK
QHSGVSGVWV IGDVTSGPML AHKAEDEAVA CIERIAGHAA EVNYGVIPGV IYTRPEVASV
GKGEEELKAE GRAYKVGKFP FTANSRAKIN HETEGFVKIL ADANTDQILG VHMIGPSVGE
LIGEYCVAME FSASAEDIAL TCHPHPTRSE AGRQAAMGVH GWTMQA
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