| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1103 |
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| Symbol | |
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| ID | 5108076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1238953 |
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| End bp | 1240152 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640502327 |
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| Product | Bcr/CflA subfamily drug resistance transporter |
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| Protein accession | YP_001186602 |
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| Protein GI | 146306137 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.278959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.00752766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGCCCGT CCCGCCTGCT GCTTTTGATC CTGATGCTGC TCACCGCGCT GGGGGAAATC
TCCACGCAAT TGCTGATTCC CGCCCTCGGC GCCCTGGAGC GTGGGCTGCA CGCGGTGCCT
GGCAGCAGCC TGCTGGCGCT GACGCTGTTC GTCGCCGCCT TCGGCCTCGG CCAACTGTTC
TTCGGGCCGT TGTCCGATCG CCTCGGTCGG CGCCCGGTGC TGCTGGCCGG GTTGTCGCTG
TACCTGCTGG CGAGCCTGGG CATGCTGCTG GCGGAAAACA TCCAGATGCT GATCGCCGCC
CGCGTGCTGC AGGGCTTCGG CGCCTGTGCT GCGCTGGTGC TGGCGCGCGC CATCGTGCGT
GACGTGTGGC AGGCCGAGGC GGGTCCGGCC CTGGCGCTGA CGGTGCTGGG CATGTTCACC
GCCATCGTCC TGTCGCCGCT GCTCGGCGGC CTGCTGACCC AGTACGGCGG CTGGCGCGCG
CCGCTGGTGG CCAGCCTGGT GGTCGGCAGC GTGGCCCTGC TGGCAGTGCT CGGCGGCTAT
CGCGAGAGCC ACGTGCAGCG CGACCCGCAG GCCGGGCGGC TGAGTCGCCT GGCGGGCGAT
TACCGCGATC TTCTGCGCAG CTGCCGGGCC CTGGCGCTGA CCATCGCCGC CACCTACGGT
GCCATGTTCG TCGTGGTGGC CGGCTCCTCG GCGGTCTATA TCGGCCTGCT CGGCCTGACG
GCTGCGCAGT ACGGCATGAC CTTCGCGGCC ATCGTTTCCG GCCTGCTCGG CGGCGCCCTG
TTCACCCTGC GCAACGTGCA GCGGCTGGGG CCGCAGCGGG TGGTGGCCAT CGGTGTGGCA
CTGGTGCTGA CCGGCGCCTT CCTGACCCTG GCGATCTATC TGCTGTTTGG CCTGTCGCTG
CTCGGCCTGT CGCTGCCGCA GATGCTGGTC ACCCTCGGCG GCGGCATGGT CCTGCCGGCG
GCGGTGGCCG GCGCGGTGAT CCCCAACCCG CAGCGCGCCG GCTTGGCGGC CGGGCTGATG
GGCTTTGCGC AGATGGCCGG GGCGACCCTT GGCGGTTTGC TGCTGACCTG GCTGCAGGAC
GGTTCGGCCT GGCCTATGGT TGCCTTGCAC GCCCTGTTCG CCGCGCTGGC GTTTGCCGGC
TTCCACCTGC TGCGTGCGCG CCCGATTCCA ATCCCCGAAG CGAGGAGAGT CTCTTCATGA
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| Protein sequence | MRPSRLLLLI LMLLTALGEI STQLLIPALG ALERGLHAVP GSSLLALTLF VAAFGLGQLF
FGPLSDRLGR RPVLLAGLSL YLLASLGMLL AENIQMLIAA RVLQGFGACA ALVLARAIVR
DVWQAEAGPA LALTVLGMFT AIVLSPLLGG LLTQYGGWRA PLVASLVVGS VALLAVLGGY
RESHVQRDPQ AGRLSRLAGD YRDLLRSCRA LALTIAATYG AMFVVVAGSS AVYIGLLGLT
AAQYGMTFAA IVSGLLGGAL FTLRNVQRLG PQRVVAIGVA LVLTGAFLTL AIYLLFGLSL
LGLSLPQMLV TLGGGMVLPA AVAGAVIPNP QRAGLAAGLM GFAQMAGATL GGLLLTWLQD
GSAWPMVALH ALFAALAFAG FHLLRARPIP IPEARRVSS
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