Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1099 |
Symbol | |
ID | 5108072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1235125 |
End bp | 1236381 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640502323 |
Product | cyanophycinase |
Protein accession | YP_001186598 |
Protein GI | 146306133 |
COG category | [P] Inorganic ion transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4242] Cyanophycinase and related exopeptidases |
TIGRFAM ID | [TIGR02069] cyanophycinase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.517521 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.0298062 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGAT CGGTTATTCG TTACACCCTC ATGCTGGCTC TTCTGTTACC GCTGCCGGCC CTGGCGGCCG GCCCGCTGCT GCTGGTGGGC GGCGGGCTCA AGGACGACAA CGCGGTCATC TACCAACGTC TGGTGCAGCT GGCCGGCGGC AGTCAGGCGC GCATCGGCGT GATCACCGCC GCCTCGATTC CACCGAGCCA GGACCCCGAC GCCGGCACCG CCAACGCGCG CAACTCCAAG TCCAATGGCG AGTTCTACGC ACAGCTGCTG AAGACCTACG GCGCCCAGGA TGCCCAGTGG ATCCCCATCG ACCTGGACAG CATCGGCAAC AACAGCAACC CGCAGGTGAT CGCGCAGATC AACGGCATGA CCGGCTTCTT CTTCGGCGGC GGCGACCAGG CGCGCCTTAC CCAGACGCTG CAGACCGCAA CGCGCGCCGA CACGCCGGCA CTGGCCGCGA TTCGCGCCCG GCACGCTGCC GGCGCCGTGC TCGCCGGCAG CAGCGCGGGA ACCGCGATCA TGGTCGGCGG GCCGATGATC ACCGGCGGCG AGAGCTATCC CGCTCTGCGC TACGGCGTCT ACACCACCCC GGGCGGTGAT GACCTGTCCT ACGACATGCA GGGCGGTTTC GGCTTCTTCA GCCATGGCCT GCTCGACACC CATTTCAGCG AGCGCGGCCG TCAGGGGCGC ATCGTGCGCC TGGCCGACTA CACCAACGTG CCGTTCGCCT ACGGCGTCGA CGAGGACACC GCGCTGCTGG TGCAGCAGAA CCCCAGCCTC GGCCAGGTGG AGATGGAGGT GCTCGGCAGC AACGGCGTGT TCATCTTCGA CCTGCGCAAC AAGCAGCGTG GCACCGGCAG CAGCTACGCC CTCTACGACG TGCTGGCCAG CTACCTGACC GCCGGCGACC GCTACCGCCC GGCCAATCAG CAGTTCGTGA TCGCCAGCGG CAAGACCAGC CTGCGTGGGC GCGAGTACTA CAGCTCGGCG ATGACCGCCA CCGGCGACAT CTTCAGCAGC CCGAACAACA GCGGTGCCAA CGGCCGACGC AACCCGCGCG AGTTCGTCAA GGTCAGCACC GACCTGTTCG ACAGCCGCTC GACCAGCACC CTGGGCCGCA CCTACGAAAG CAATCCGCGT TTCCGCGTCG ACCTGATCAA GAGCACCACC TTCGACAGTC ACGGCTATCA GGGGGTTATC AACGGCAAGC GCCTGACCTC CTATCTGCGT CTGCGCGTGG ATATGCGCCC CAACTGA
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Protein sequence | MIGSVIRYTL MLALLLPLPA LAAGPLLLVG GGLKDDNAVI YQRLVQLAGG SQARIGVITA ASIPPSQDPD AGTANARNSK SNGEFYAQLL KTYGAQDAQW IPIDLDSIGN NSNPQVIAQI NGMTGFFFGG GDQARLTQTL QTATRADTPA LAAIRARHAA GAVLAGSSAG TAIMVGGPMI TGGESYPALR YGVYTTPGGD DLSYDMQGGF GFFSHGLLDT HFSERGRQGR IVRLADYTNV PFAYGVDEDT ALLVQQNPSL GQVEMEVLGS NGVFIFDLRN KQRGTGSSYA LYDVLASYLT AGDRYRPANQ QFVIASGKTS LRGREYYSSA MTATGDIFSS PNNSGANGRR NPREFVKVST DLFDSRSTST LGRTYESNPR FRVDLIKSTT FDSHGYQGVI NGKRLTSYLR LRVDMRPN
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