| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1080 |
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| Symbol | |
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| ID | 5107739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1217304 |
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| End bp | 1218029 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502304 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001186579 |
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| Protein GI | 146306114 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.950195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.541205 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCATC TGCTGCTCGC TCTGCTGCTG TCGACTACAA CGCTGGCTGC CGCGCAACCC
TGGCGGGTGG TGGGCGACGA ACAGTTCGCG CCCTACAGCT TCGTCACCGA CGCGGACGAC
ACGCCGCACG GCCTGGACGT GGAACTGGTC GATGCGGTGC TGCGCGAGGC CGGGGTCGCC
TACGAAATCC GCCTTTACCC CTGGGAACGG GTCAAGCGCA TGCTCGATCG CGGTGAGGTG
CAGATGGCCT TTCAGTTCGC CGGCACCCCG CAGCGTCAGG AACAGTACGA GCTGGTCGGC
CCGCTGCGCA GCGGCGCGAC CGTGTTCATG ACCACCGCCA AGACCGCCAT CAGCGACTGG
CAGACGCTGG ACGACTTCTC CCCCTATGTC ATCGGCCAGG TCCGCGGCTA CGTCTACGAA
GAGCACTTCG ACCGCGCCGA CCTGGCGCGC GACACCAGCG CGCAGAATCC GCGCCAGCTG
GTCTCGATGC TGCTGGCCGG CCGCATCGAC ATCATCGTCG GCGACCGCGT GCAGCTGCAG
TATTTCGTGC ATGAGCAGCG CGCCCAGGAC CAGGTGCGCA TCCTGCCTCG CCCGCTGATC
CAGATGCCGC GCTTCGTCGC CTTCGCCAAG GGCGACATCG AACGTGCCCG GCAATTCTCC
GAGGCGCTGG TACGCCTGCG CAATGCCGGC AAGCTGGATG AAATCCAGCA GCGCTGGGCG
CCGTGA
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| Protein sequence | MRHLLLALLL STTTLAAAQP WRVVGDEQFA PYSFVTDADD TPHGLDVELV DAVLREAGVA
YEIRLYPWER VKRMLDRGEV QMAFQFAGTP QRQEQYELVG PLRSGATVFM TTAKTAISDW
QTLDDFSPYV IGQVRGYVYE EHFDRADLAR DTSAQNPRQL VSMLLAGRID IIVGDRVQLQ
YFVHEQRAQD QVRILPRPLI QMPRFVAFAK GDIERARQFS EALVRLRNAG KLDEIQQRWA
P
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