| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1055 |
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| Symbol | |
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| ID | 5107714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1192471 |
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| End bp | 1193403 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502277 |
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| Product | ribose-phosphate pyrophosphokinase |
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| Protein accession | YP_001186554 |
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| Protein GI | 146306089 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
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| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.973686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.13758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGGTCT TCACGGGGAA CGCAAACCCC GATCTGGCGC GACGGATCGT TCGTCAGCTG
CACATTCCCC TCGGCGATGC TTCGGTCGGC AAGTTCTCCG ACGGCGAAGT CATGATCGAA
ATCAACGAAA ACGTCCGCGG CAAGGACGTG TTCCTGATTC AGCCGACCTG TGCACCCACC
AACGACAACC TGATGGAACT GGTAGTGATG GCCGACGCCT TCCGCCGTTC CTCGGCTACC
CGCATCACCG CGGTCATCCC CTACTTCGGT TACGCCCGCC AGGATCGCCG TCCGCGTTCC
GCTCGCGTGG CGATCAGCGC TAAAGTCGTG GCCGACATGC TCACCGTGGT CGGTATCGAC
CGCGTGCTGA CCGTCGACCT GCACGCTGAC CAGATCCAGG GTTTCTTCGA CATTCCGGTG
GACAACATCT ACGGTTCCCC GGTCCTGGTC GACGACATCG AAGACCAGCG CTTCGACAAC
CTGATGATCG TCTCCCCCGA TATCGGCGGC GTCGTTCGTG CCCGCGCCGT GGCCAAGAGC
CTGGGCGTCG ACCTGGCGAT CATCGACAAG CGTCGCGAGA AGGCCAACCA GTCCGAAGTG
ATGCACATCA TCGGTGACGT GGAAGGCCGT ACCTGCATCC TGGTCGACGA CATGGTCGAC
ACCGCCGGTA CCCTGTGCCA CGCCGCCAAG GCGCTGAAAG AGCGCGGCGC CGCCAAGGTC
TACGCCTACT GCACCCACCC GGTGCTGTCC GGCCGCGCCA TCGAGAACAT CGAGAATTCC
GTCCTGGACG AGCTGGTGGT CACCAACACC ATCCCGCTGT CCGCTGCGGC GCAGTCCTGC
TCGCGCATTC GCCAGCTCGA CATCGCCCCG GTCGTCGCCG AAGCGGTTCG CCGCATCAGC
AACGAAGAAT CGATCAGCGC GATGTTCCGT TAA
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| Protein sequence | MMVFTGNANP DLARRIVRQL HIPLGDASVG KFSDGEVMIE INENVRGKDV FLIQPTCAPT
NDNLMELVVM ADAFRRSSAT RITAVIPYFG YARQDRRPRS ARVAISAKVV ADMLTVVGID
RVLTVDLHAD QIQGFFDIPV DNIYGSPVLV DDIEDQRFDN LMIVSPDIGG VVRARAVAKS
LGVDLAIIDK RREKANQSEV MHIIGDVEGR TCILVDDMVD TAGTLCHAAK ALKERGAAKV
YAYCTHPVLS GRAIENIENS VLDELVVTNT IPLSAAAQSC SRIRQLDIAP VVAEAVRRIS
NEESISAMFR
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