| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1054 |
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| Symbol | |
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| ID | 5107713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1191760 |
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| End bp | 1192365 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640502276 |
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| Product | 50S ribosomal protein L25/general stress protein Ctc |
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| Protein accession | YP_001186553 |
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| Protein GI | 146306088 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.162077 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATT TTGCCCTGAA TGCCGAAGTG CGTTCCGACC TGGGGAAAGG TGCGAGCCGC
CGCCTGCGTC GTAACGTGTC CATGGTTCCT GCCGTGATCT ACGGTGGCGA CAAGGCCCCG
CAATCCATCA GCCTGCTGGC CAAAGACCTG GCCAAGCTGC TGGAAAACGA AGCCGCTTTC
AGCCACGTTC TGGCTGTCAA CGTTGCCGGT GCTACCGAAA ACGTCGTGAT CAAGGCCCTG
CAGCGCCACC CGGCCAAAGG CTTCGTCCTG CACGCTGACT TCCAGCGCGT CGTTGCCGGC
CAGAAGCTGA CCGCCCACGT ACCGCTGCAC TTCATCAACG AAGCAACCGC CGTTGGCGTG
AAGCAGCAGG GTGGCGAGAT CTCCCACACC ATCAACGAAG TCGAAGTTTC CTGCCTGCCG
AAAGACCTGC CGGAATTCAT CGAAGTCGAC ATGGCTGCCG TAGAAGTTGG CCAGACCGTC
CACATGTCCG ACCTGAAGCT GCCGAAAGGC GTTGAGCTGG TTGCTCTGGC TCACGGTAAC
GACCTGGCTG TCTCCAACAT TCACGCTTCC CGCGTGAAGG CTGAAGACGA AGGCGCTGCC
GAGTAA
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| Protein sequence | MTDFALNAEV RSDLGKGASR RLRRNVSMVP AVIYGGDKAP QSISLLAKDL AKLLENEAAF
SHVLAVNVAG ATENVVIKAL QRHPAKGFVL HADFQRVVAG QKLTAHVPLH FINEATAVGV
KQQGGEISHT INEVEVSCLP KDLPEFIEVD MAAVEVGQTV HMSDLKLPKG VELVALAHGN
DLAVSNIHAS RVKAEDEGAA E
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