| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1045 |
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| Symbol | |
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| ID | 5106553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1180935 |
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| End bp | 1181354 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640502268 |
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| Product | PilT domain-containing protein |
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| Protein accession | YP_001186545 |
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| Protein GI | 146306080 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0543043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.324928 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTGC TTGATACCAA CGTGCTGTCG GAACTCATGC GTGCCAAGCC TGCGCCTCAG
GTTCTGGAGT GGGTTGACGC TCAGCCTGTC GGGGATCTGG TAATCACCTC GATCACCGTT
GCGGAAATTC TCTATGGCAT TGCCAAGATG CCGGACGGGA AACGCAAGCA GGGACTGCTC
GATGTAGCCT CGGTCATGTT CGATGAAGAC TTCGCGGGCA ATATCCTGCC GTTCGATGCA
GATGCCGCTG TGCATTACGC AGAGATAGCC GCAGAAACCG AGGCTAAAGG GCAGGTGGTT
GATATGGCCG ATGCGCAGAT CGCTGCAATC GGTCGGCTAC ATGATGCCGT GATCGCAACT
CGCAATATTC GCCACTTCGA AACGCTAGGC GTTGCCCTGG TAGATCCCTG GAGCAATTAG
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| Protein sequence | MILLDTNVLS ELMRAKPAPQ VLEWVDAQPV GDLVITSITV AEILYGIAKM PDGKRKQGLL
DVASVMFDED FAGNILPFDA DAAVHYAEIA AETEAKGQVV DMADAQIAAI GRLHDAVIAT
RNIRHFETLG VALVDPWSN
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