| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1031 |
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| Symbol | |
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| ID | 5108653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1168797 |
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| End bp | 1170107 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502253 |
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| Product | GDP-mannose 6-dehydrogenase |
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| Protein accession | YP_001186531 |
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| Protein GI | 146306066 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATCA GTATCTTCGG TTTGGGTTAT GTAGGCGCTG TATGTGCCGG CTGTTTGTCG
GCCCGCGGCC ATGACGTTAT TGGCGTGGAT ATCTCAGCGA CCAAGATCGA CCTGATCAAC
AACGGCAAGT CGCCCATCGT CGAGCCGGGT CTGGAGGAGC TGCTGCAACA GGGTCTGCGC
CAGGGCCGCC TGCGTGGCAC GACCGATGTC ACCGCCGCGG TACTGGAGAG TGATGTGTCG
TTCATCTGCG TCGGTACTCC GAGCAAGAAG AACGGCGATC TGGAACTGAA CTACATCGAA
GGCGTGTGCC GCGAGATCGG CCTGGCCCTG CGCGACAAGG CCGAGCGCCA CACCGTGGTG
GTACGCAGCA CCGTACTGCC GGGCACCGCC AAGAACGTGG TACTGCCGAT TCTCGAGGAC
TGCTCGGGCA AGAAGGCCGG TGCCGATTTC GGCCTGGCGG TGAACCCCGA GTTCCTCCGC
GAAAGCACCG CGATCAAGGA CTACGACTTC CCGCCGATGA CCGTCATCGG TGAGCTGGAC
AAGGCCTCCG GCGATCTGCT GGAAAGCATC TACAGCGAGC TGGACGCGCC GATCATCCGC
AAGGACATCG AAGTCGCCGA GATGATCAAG TACACCTGCA ACGTCTGGCA CGCGGCCAAG
GTCACCTTCG CCAACGAGAT CGGCAACATC GCCAAGGCGG TCGGCGTCGA CGGTCGCGAG
GTGATGGACG TGGTCTGCCA GGACCACAAG CTGAACCTGT CCAAGTACTA CATGAAGCCC
GGCTTCGCCT TCGGCGGCTC CTGCCTGCCC AAGGACGTGC GTGCGCTGAA CTACCGCGCC
AGCAGCCTGG ACGTGGAAGC GCCGCTGATC GGCTCGCTGA TGCGCAGCAA CGCCGCTCAG
GTGCAGAAGG CCTTCGACAT CATCGCCAGT CACGACTCGC GCAAGGTCGC CCTGCTCGGC
CTGAGCTTCA AGGCCGGTAC CGACGACCTG CGTGAAAGCC CGCAGGTGGA GCTGGCCGAG
ATGCTGATCG GCAAGGGCTA CGACCTGAGC ATCTACGACC GCAACGTCGA GTACGCCCGC
GTCCACGGCG CCAACAAGGA CTACATCGAG TCGAAGATCC CGCACGTTTC CTCGCTGCTC
AACAGCGATC TGGATGACGT GGTGGCGAAC GCCGACATCA TCGTCCTGGG CAACAGCGAC
GAGCGCTTCG CCAAGCTGGC CGAGCAGGCC CCGAGCGGCA AGCGCGTGGT CGACCTGGTC
GGTTTCATGC CCCACGCCAG CAACGGCGTG GCCGAAGGCA TCTGCTGGTA A
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| Protein sequence | MRISIFGLGY VGAVCAGCLS ARGHDVIGVD ISATKIDLIN NGKSPIVEPG LEELLQQGLR
QGRLRGTTDV TAAVLESDVS FICVGTPSKK NGDLELNYIE GVCREIGLAL RDKAERHTVV
VRSTVLPGTA KNVVLPILED CSGKKAGADF GLAVNPEFLR ESTAIKDYDF PPMTVIGELD
KASGDLLESI YSELDAPIIR KDIEVAEMIK YTCNVWHAAK VTFANEIGNI AKAVGVDGRE
VMDVVCQDHK LNLSKYYMKP GFAFGGSCLP KDVRALNYRA SSLDVEAPLI GSLMRSNAAQ
VQKAFDIIAS HDSRKVALLG LSFKAGTDDL RESPQVELAE MLIGKGYDLS IYDRNVEYAR
VHGANKDYIE SKIPHVSSLL NSDLDDVVAN ADIIVLGNSD ERFAKLAEQA PSGKRVVDLV
GFMPHASNGV AEGICW
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