Gene Pmen_0997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0997 
Symbol 
ID5108619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1126194 
End bp1126601 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content63% 
IMG OID640502214 
Producthypothetical protein 
Protein accessionYP_001186497 
Protein GI146306032 
COG category 
COG ID 
TIGRFAM ID[TIGR02096] conserved hypothetical protein, steroid delta-isomerase-related 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000466996 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value8.0025e-19 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCCCGCCG CCGTTCGCGA CCTGCTGCAA CGTTACTTTC AAGCGCTCAA TGATCGCGAT 
GCCCGCGCCT GTCTGGCGCT GGTCAGTGCC GACGTCACGC TGGAGCCCAA CCAGGGCTTC
GTCGAACATG GACGTGAGGC GTTTGCGGCC TATCTCGAGC GCCACATGCG TTGTTATCGC
GAAAGCCTCG AGCAACTGGT GATACTGACC GAGCCGGACG GGCGTCATGC CGCGTGCGAG
TACCGTGTAC AGGGCGAGTA TCTGGCCACC GACGAGGGGC TGCCGGAGGC CTGCGGCCAG
CGCTACGAAG CACGCGTGGG GGCCTTTTTC GAGATGCAGG ACGGTCTGAT CAGCCGCATC
AGCCTGCATT TCAATCTGCC GGACTGGCTG GCTCAGGTCG ACGACTGA
 
Protein sequence
MPAAVRDLLQ RYFQALNDRD ARACLALVSA DVTLEPNQGF VEHGREAFAA YLERHMRCYR 
ESLEQLVILT EPDGRHAACE YRVQGEYLAT DEGLPEACGQ RYEARVGAFF EMQDGLISRI
SLHFNLPDWL AQVDD