| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0989 |
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| Symbol | |
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| ID | 5108611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1118765 |
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| End bp | 1120312 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502206 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001186489 |
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| Protein GI | 146306024 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000000770176 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAGCA ACGATCGCGT CATCATCTTC GACACCACCC TGCGCGACGG CGAGCAGAGC
CCCGGCGCCT CGATGACCGG CGAGGAGAAG CTGCGCATCG CCAAGGCCCT GGAGCGGCTG
CGGGTGGACG TGATCGAGGC CGGTTTCGCC ATCGCCAGCC CGGGCGACTT CGCCGCAGTC
AAGGCGATCG CCGACAATAT CAAGGACAGC ACCGTGTGCA GCCTGTCGCG TGCGGTGGAC
GCCGACATCG AGCGCGCCGC CGAAGCGCTC AAGGGCGCCA ACAGCGGGCG CATCCACACC
TTCATCGCCA CCAGCCCGAT CCATATGCAG TACAAGCTGC GCATGCAGCC GGACGACGTG
GTGGCTCAGG CCGTGTATGC GGTGAAGAAG GCGCGCAACC TGTGCAGCGA CGTGGAGTTC
TCCTGCGAGG ACGCCGGCCG TTCGGAGATC GATTTCCTCT GCCGCATCAT CGAGGCGGCC
ATCGACGCCG GCGCGCGTAC CATCAACATC CCCGACACCG TCGGCTACGC CATCCCGCAC
CAGTACGCCG ACACCATCCG CCAGTTGCTC AAGCGCGTGC CCAATGCCGA CAAGGCGATC
TTCTCGGTGC ACTGCCACAA CGACCTCGGC CTGGCCGTGG CCAACTCCCT GGCCGCCGTG
GTGGCCGGTG CACGTCAGGT GGAATGCACC ATCAACGGCC TGGGCGAGCG TGCCGGCAAC
GCCGCGCTGG AAGAGATCGT CATGGCCATC AAGACCCGCC AGGACCTGCT CGGCGTGCAC
ACCAACATCG ACACCCCGCA TATCTTGAGC ACCTCGCGCA TGGTCTCCGG CATCACCGGC
TTTCCGGTGC AGCCGAACAA GGCCATCGTC GGTGCCAACG CCTTCGCCCA CGAGTCCGGC
ATCCACCAGG ACGGGGTGCT CAAGCACCGC GAGACCTACG AGATCATGTC GGCCCAGTCG
GTGGGCTGGA ACACCAACAA GATGGTCATG GGCAAGCACT CCGGGCGCGC CGCCTTCCGT
TCGCGCCTGG ACGAGCTGGG CATCGTCCTG GCCGGCGAGG CCGAGCTGAA CGCCGCCTTC
GCCCGCTTCA AGGAGCTGGC CGACAAGAAG CACGAGATCT TCGACGAGGA CCTGCAGGCG
CTGGTTTCCG ACACCCTGGC CGAGGAAGCG CCGGAGCACT ACAAGCTGGT CACCCTGGAA
GTGGCGAGCA AGACCGGCGA GGTGCCGCAG GCGCAGCTCG TGGTCAGCGT CGAGGGGCAT
GAGCAGCGTG CCAGCGCCGA GGGTTCCGGG CCGGTGGACG CCACCTTCAA GGCCATCGAG
GCCATCGCCG CCTCCGAGGC CAGCCTGCTG CTGTACTCGG TCAACGCCAT CACCAAGGGC
ACCGACTCGC AGGGCGAGGT CACCGTGCGC CTGGAGAAGG GCGGGCGCAT CGTCAATGGC
AACGGCGCCG ACACCGACAT CCTGGTGGCC TCGGCCAAGG CCTATATCAA CGCGCTGAAC
CTGATGCAGG TCGGGCAGAA GGCGCATCCG CAAGTGGAGG GCGTGTGA
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| Protein sequence | MSSNDRVIIF DTTLRDGEQS PGASMTGEEK LRIAKALERL RVDVIEAGFA IASPGDFAAV
KAIADNIKDS TVCSLSRAVD ADIERAAEAL KGANSGRIHT FIATSPIHMQ YKLRMQPDDV
VAQAVYAVKK ARNLCSDVEF SCEDAGRSEI DFLCRIIEAA IDAGARTINI PDTVGYAIPH
QYADTIRQLL KRVPNADKAI FSVHCHNDLG LAVANSLAAV VAGARQVECT INGLGERAGN
AALEEIVMAI KTRQDLLGVH TNIDTPHILS TSRMVSGITG FPVQPNKAIV GANAFAHESG
IHQDGVLKHR ETYEIMSAQS VGWNTNKMVM GKHSGRAAFR SRLDELGIVL AGEAELNAAF
ARFKELADKK HEIFDEDLQA LVSDTLAEEA PEHYKLVTLE VASKTGEVPQ AQLVVSVEGH
EQRASAEGSG PVDATFKAIE AIAASEASLL LYSVNAITKG TDSQGEVTVR LEKGGRIVNG
NGADTDILVA SAKAYINALN LMQVGQKAHP QVEGV
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