| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0951 |
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| Symbol | |
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| ID | 5108809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1073484 |
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| End bp | 1075025 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640502168 |
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| Product | integral membrane protein MviN |
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| Protein accession | YP_001186451 |
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| Protein GI | 146305986 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
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| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.979751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.521611 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGC TCAAATCCCT GGCTGCCGTC AGCTCCCTGA CCATGGTGTC GCGTGTGCTG
GGGTTTGTGC GCGACACCAT CATCGCCCGC ACCTTCGGCG CGGGGGTGGC ATCGGATGCC
TTCGTGGTAG CGTTCAAGCT GCCCAACCTG CTGCGCCGCA TCTTCGCCGA GGGCGCCTTC
TCCCAGGCCT TTGTGCCGAT TCTGGCCGAA TACAAGATGC AGCAGGGCGA GGAGGCCACG
CGCACCTTCA TCGCCTACGT GTCCGGTTTG CTGACCTTGG TGCTGGCGCT GGTTACGGCC
ATCGGCGTGC TCGCCGCGCC CTGGATCGTC TGGGCCACGG CGCCCGGGTT CGCTGCCGAG
GCCGAGCGTT TCGAGCTGAC CGTCGATCTG CTGCGGGTGA CCTTCCCCTA TATATTGCTG
ATTTCCCTGT CCTCACTGGC TGGGGCCATT CTCAATACCT GGAACCGCTT CTCGGTGCCG
GCATTCGTGC CGACCCTGCT CAACGTCAGC ATGATCGTTT TCGCGCTGTT TCTGACGCCC
TATTTCGATC CGCCGATCAT GGCGCTGGGC TGGGCGGTGC TGGTTGGCGG GCTGGCACAG
TTGCTCTGGC AACTGCCGCA CCTGAAGAAG ATCGGCATGC TGGTACTGCC GCGCCTGAGT
TTCGGCGACC TGGGCGTCTG GCGCGTGCTC AAGCAGATGG GGCCGGCGAT CTTCGGCGTG
TCGGTCAGCC AGATTTCCTT GATCATCAAC ACCGTCTTCG CCTCGTTCCT GGTGGCCGGC
TCGGTGTCCT GGATGTACTA CGCCGACCGC CTGATGGAGC TGCCCTCGGG GGTGCTGGGC
GTGGCGCTGG GGACCATCCT GCTGCCGGCG CTATCGAAAA CCTACGCGAG CAAGGACCGT
GACGAATACC GCCGCCTGCT CGACTGGGGG CTGCGCCTGT GCTTCCTGCT GGTGCTGCCC
TGCACCCTGG CGCTGGCGAT TCTCGCCGAG CCGCTGGTGG TGTCGCTGTT CCAGTACGGC
AAGTTCACCG CCAACGATTC GCTGATGACG CAGCAGGCGC TGATGGCCTA CGCGGTCGGC
CTGCTGGCGC TGATCCTGGT GAAGATTCTC GCGCCGGGGT TCTACGCGCA GCAGAACATC
AAAACGCCGG TACGCATCGC GGTGGTCAGT CTGCTGGCGA CCCAGGCGAT GAACGCGCTG
TTCGTCTTCG GTCTGGAGAT GGCGCACGTC GGCCTGGCGC TGGCGATCAG CCTGGCGGCC
TGTCTGAACG CCGGCCTGCT GTACTGGCAA CTGCGCCGCG CCGATATCTT CCAGCCGCTG
CCGGGCTGGG GGCTGTTCTT GTTCAAGCTG GCGGTGGCGG TGGCGGTGAT GGTCGCGGTG
CTGCTGGGGC TGCTGCAGAT AATGCCGGCC TGGGCCGAGG GCGAGATGCC GCTGCGTCTA
CTGCGCCTGG GCGCGCTGGT GCTTGCCGGC GTGGTGGTGT ACTTCGGCAC GCTGCTGCTG
TTGGGGTTTC GTCTGCGCGA CTTCGCGCGC AAGGCGCTAT AG
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| Protein sequence | MNLLKSLAAV SSLTMVSRVL GFVRDTIIAR TFGAGVASDA FVVAFKLPNL LRRIFAEGAF
SQAFVPILAE YKMQQGEEAT RTFIAYVSGL LTLVLALVTA IGVLAAPWIV WATAPGFAAE
AERFELTVDL LRVTFPYILL ISLSSLAGAI LNTWNRFSVP AFVPTLLNVS MIVFALFLTP
YFDPPIMALG WAVLVGGLAQ LLWQLPHLKK IGMLVLPRLS FGDLGVWRVL KQMGPAIFGV
SVSQISLIIN TVFASFLVAG SVSWMYYADR LMELPSGVLG VALGTILLPA LSKTYASKDR
DEYRRLLDWG LRLCFLLVLP CTLALAILAE PLVVSLFQYG KFTANDSLMT QQALMAYAVG
LLALILVKIL APGFYAQQNI KTPVRIAVVS LLATQAMNAL FVFGLEMAHV GLALAISLAA
CLNAGLLYWQ LRRADIFQPL PGWGLFLFKL AVAVAVMVAV LLGLLQIMPA WAEGEMPLRL
LRLGALVLAG VVVYFGTLLL LGFRLRDFAR KAL
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