Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0945 |
Symbol | |
ID | 5108803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1067918 |
End bp | 1069180 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640502162 |
Product | uracil-xanthine permease |
Protein accession | YP_001186445 |
Protein GI | 146305980 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2233] Xanthine/uracil permeases |
TIGRFAM ID | [TIGR00801] uracil-xanthine permease |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.476044 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCAAA CGGAATTCAA CGACCCGCTG TGGCGCCAGG GCATTTCCGG CGCGCAAATG CTGTTCGTGG CCTTCGGCGC CCTGGTGCTG ATGCCGCTGA TCACCGGCAT GGACCCCAAC GTCGCGCTGT TCACCGCCGG TATCGGCACC CTGCTGTTCC AGCTGGTGAC CAAGCGCCAG GTGCCGGTGT TCCTGGCCTC CAGCTTCGCC TTCATCGCGC CGATCCTGGC CGCCAAGGGC GAGTTCGGCC TGCCGGCGGT GATGGGCGGC GTGATCGCCG CCGGTCTGGT CTACATCCTG CTCTCGGCCC TGGTGAAACT GCGCGGCCCT GGCTTCATCG ACCGTCTGTT GCCGCCGGTG GTGATTGCTC CGGTGATCAT CTCCATCGGC CTGGCGCTGT CGCCGGTGGC GGTGAACATG GCCATGGGCA AGGCCGGTGA CGGCAGCGTC GAACTGGTGC CCTACAGCAC CGCGATGATG ATCTCGATGC CGGCCTTGCT CACCACCCTG CTGGTGGCCG TGCTCGGCCG CGGCATCTTC CGTCTGGTGC CGATTCTCGC CGGCATCGCC GTTGGCTGCG CGATCTCGGC CGTGCTGGGG GTGATCGACA CCAGCGCAGT GGCGCAGGCT TCCTGGCTCG CCGTGCCCAA TTTCATCGCA CCGGAGCTGC ATTGGGGGGC AATCCTGTAC ATGGTGCCCG TGGCGCTGGC GCCGGCCATC GAGCATATCG GCGGCGTGGT CGCCATCGGC AACGTCACCG GCAAGAACTT CGTCAAGAAG CCCGGCCTGC ATCGCACCCT GCTCGGCGAC GGCCTGGCCA CCTCGGCAGC CGGCCTGTTC GGCGGCCCGC CCAACACCAC CTATGCAGAA GTCACTGGCG CGGTGATGCT AACCAAGAGC TACAACCCGA AAGTCATGAC CTGGGCTGCG GTCTTCGCCA TCGCCCTGGC CTTCATCGGC AAGTTCGGCG TGGCCCTGCA AAGCATTCCG GCTCCGGTGA TGGGCGGCAT TCTCTGCCTG CTGTTCGGCT CCATCGCCGT GGTCGGCCTC AATACCCTGA TCCGCCATCA GGTCGATCTG TCCGAGGCGC GCAACCTGAT CATCGTCTCG GTGACGCTGG TATTCGGCAT CGGCGGCATG GTGATCGGCG GCAAGGAATT CGCCCTGTCG GGCATTTCCC TGTGCGCGGT CAGCGCCCTG CTGCTCAACC TGCTGCTGCC TGGCGGCGCC GGCTGGCGCA ACCGGGATCT CGAACAGAGC TGA
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Protein sequence | MSQTEFNDPL WRQGISGAQM LFVAFGALVL MPLITGMDPN VALFTAGIGT LLFQLVTKRQ VPVFLASSFA FIAPILAAKG EFGLPAVMGG VIAAGLVYIL LSALVKLRGP GFIDRLLPPV VIAPVIISIG LALSPVAVNM AMGKAGDGSV ELVPYSTAMM ISMPALLTTL LVAVLGRGIF RLVPILAGIA VGCAISAVLG VIDTSAVAQA SWLAVPNFIA PELHWGAILY MVPVALAPAI EHIGGVVAIG NVTGKNFVKK PGLHRTLLGD GLATSAAGLF GGPPNTTYAE VTGAVMLTKS YNPKVMTWAA VFAIALAFIG KFGVALQSIP APVMGGILCL LFGSIAVVGL NTLIRHQVDL SEARNLIIVS VTLVFGIGGM VIGGKEFALS GISLCAVSAL LLNLLLPGGA GWRNRDLEQS
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