| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0940 |
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| Symbol | |
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| ID | 5108798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1062581 |
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| End bp | 1063408 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640502157 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001186440 |
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| Protein GI | 146305975 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.546965 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATGA ACGTCGACGA ACTGGTGAAA ATGTCCGAGG CCTGGCTGCC CGTGGTGCTG
GAGTACAGCG GCAAGCTGAC CCTGGCGGTG ATCACCCTGC TGATCGGCTG GTGGCTGATC
GGTCGGCTGA CCGCCAGCAT CGGGCGTCTG CTCGAGGCGC GGCGTGTGGA TCGGGCGTTG
AGCAGCTTTA TCGGCAGCCT GGTGAGCATC GTGCTGAGGG TGCTGCTGCT GATCAGCGTG
GCCTCGATGA TCGGCGTGGA GACCACCTCC TTCATCGCCA TGATCGGTGC CGCGGGTCTG
GCCATCGGCC TGGCCCTGCA GGGCAGCCTG GCCAACTTCG CCGGCGGCGT GCTGATCATG
CTGTTTCGCC CGTTCCGCGC CGGTGACTGG ATCGAGGCGC AGGGCGTGTC CGGCAGCGTC
GACAGCATCC AGATCTTCCA CACCACGCTC AAGACCGCCG ATAACAAGGT GGTGATCGTG
CCCAATGGCG CGCTGTCCAA CGGCCACATC ACCAATTTTT CGCGCGAGCC GCGGCGTCGT
GCCGACATCA ATATCGGCAT CGATTACTCC AGCGACATCA AGCGCGCCCG TGAGGTGCTG
CTGGAGATCG CGCAGGACCC GCGCGTGCAC CTCGAGCCGG CGCCGGTGGT GTTCGTCACC
GGGCTGGGTG ACAGCGCGGT GAATCTGTCG CTGCGCGTGT GGGTGGCGAC GGCGGATTTC
TGGCCGGTGA CCTTCGCCTT CACCGAGCTG GCCAAGGAGC GTCTGACCGA AGCCGGCATC
GGCATTCCGT TCCCGCAACG GGTGGTGCAT CTGGCCAAGG CCGATTGA
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| Protein sequence | MEMNVDELVK MSEAWLPVVL EYSGKLTLAV ITLLIGWWLI GRLTASIGRL LEARRVDRAL
SSFIGSLVSI VLRVLLLISV ASMIGVETTS FIAMIGAAGL AIGLALQGSL ANFAGGVLIM
LFRPFRAGDW IEAQGVSGSV DSIQIFHTTL KTADNKVVIV PNGALSNGHI TNFSREPRRR
ADINIGIDYS SDIKRAREVL LEIAQDPRVH LEPAPVVFVT GLGDSAVNLS LRVWVATADF
WPVTFAFTEL AKERLTEAGI GIPFPQRVVH LAKAD
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