| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0934 |
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| Symbol | |
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| ID | 5108792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1056287 |
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| End bp | 1057228 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640502151 |
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| Product | hypothetical protein |
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| Protein accession | YP_001186434 |
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| Protein GI | 146305969 |
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| COG category | [H] Coenzyme transport and metabolism
[L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0352] Thiamine monophosphate synthase
[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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| TIGRFAM ID | [TIGR00586] mutator mutT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.268176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGCGCG TTCATGTCGC AGCAGCGGTG ATTCGGGGTG TCGATGGACG CATCCTGATT
GCCAGGCGCC CTCAGGACAA ACACCAGGGC GGTCTGTGGG AGTTTCCCGG CGGCAAGGTG
GAGGAGGGCG AGGCCGTGCG CGTCGCCCTC GATCGCGAGC TGGAAGAGGA ACTGGGCATT
CGCCCACAGG CGGCGCGCCC GCTGATCCAG ATTCGCCACG ACTACCCGGA CAAACAGGTA
CTGCTGGACG TCTGGGAAGT GTCGGCCTTC AGTGGCGAGC CCCATGGCGC GGAAGGCCAG
CCTCTGGCCT GGGTCAGTGA GCGGCAGTTG TTGGAGTACG AATTTCCCGC CGCCAACAAG
CCCATAGTCG CCGCTGCGCG ACTGCCCGAG CGCTACCTGA TCACCCCCGA TGGCCTGGAA
CCGAGCGAGC TGCTGGCCGG CATCCGCAGC GCCCTGGCGC AGGGCGTGCG GCTGATCCAG
CTGCGCGCAC CGAACATGTT CGATGCGCAG TATCGCGACC TGGCGGTGGA CGTGCAGGGG
CTGTGCGCCG GCAAGGCGCA GCTGATGCTC AAGGGACCGT TGGAGTGGCT GGGCGATTTT
CCTGCCGCCG GCTGGCACCT GACCGCCGAG CAGCTGCGCA GGTATGCCGC TGGCGGCCGC
CCCTTCCCGG AAGACCGCTG GCTGGCGGCG TCCTGCCACA GCGCCGAGGA GCTGGCGCTG
GCTTCGCAGA TGGGCGTGGA TTTCGCCACG CTGTCGCCGC TGCAGGCGAC GGCCACGCAT
CCCGAGGCGC CGCCGCTGGG CTGGGAGGCC GCGAGCGAGA TGCTCACCCA TTTCAACCTG
CCGGCCTATC TGCTGGGCGG CGTTGGTCCC GGCGATATCG AGCGCGCCTG GCAGACCGGC
GCTCAGGGCG TGGCGGGTAT CCGCGCGTTC TGGCCGCAGT AG
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| Protein sequence | MRRVHVAAAV IRGVDGRILI ARRPQDKHQG GLWEFPGGKV EEGEAVRVAL DRELEEELGI
RPQAARPLIQ IRHDYPDKQV LLDVWEVSAF SGEPHGAEGQ PLAWVSERQL LEYEFPAANK
PIVAAARLPE RYLITPDGLE PSELLAGIRS ALAQGVRLIQ LRAPNMFDAQ YRDLAVDVQG
LCAGKAQLML KGPLEWLGDF PAAGWHLTAE QLRRYAAGGR PFPEDRWLAA SCHSAEELAL
ASQMGVDFAT LSPLQATATH PEAPPLGWEA ASEMLTHFNL PAYLLGGVGP GDIERAWQTG
AQGVAGIRAF WPQ
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