Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0876 |
Symbol | |
ID | 5108970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 996301 |
End bp | 997110 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640502092 |
Product | ABC transporter related |
Protein accession | YP_001186376 |
Protein GI | 146305911 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.930987 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCCG AGCACGAGTA CGCGATCGAG TTGCAGGGCG TCAGCTTTCA GCGCGGTACG CGGGCGATCT TCGACAAGGT CGACATCCGC ATTCCGCGCG GCAAGGTCAC CGGTATCATG GGGCCTTCGG GTTGCGGCAA GACCACGCTG TTGCGTCTGA TCGCCGCCGA GCTGCGGCCG TCCGCCGGCG AGGTGCGGGT GGCGGGCGTC AATCTGCCGA GCCTGTCGCG TGACGAACTG TTCGACATGC GCAAGCAGAT GGGCGTGCTG TTTCAGAGTG GTGCGCTGTT CACCGATCTC GACGTGTTCG AGAACGTGGC CTTTCCGCTG CGCGTGCACA CCCAGCTGCC GGAAGAGATG ATTCGCGACA TCGTGCTGAT GAAGCTGCAG GCCGTTGGTC TGCGCGGTGC GCTGGAGTTG ATGCCCGACG AGCTGTCCGG TGGCATGAAG CGCCGCGTGG CGCTGGCCCG AGCCATCGCG CTCGATCCGC AGATTCTCCT GTACGACGAG CCCTTCGTCG GGCAGGACCC CATTGCCATG GGCGTGCTGG TGCGGCTGAT CCGTCTGCTC AACGATGCCT TGGGCATCAC CAGCGTGGTG GTGTCCCACG ATCTGGCGGA AACCGCCAGC ATCGCCGACT ACATCTACGT GGTCGGTGAT GCCCAGGTGC TGGGCCATGG TACGCCGGCC GAGCTGATGG AGTCGGATAA CCCGCGCATT CGCCAGTTCA TGAAAGGTAC CCCGGATGGT CCGGTGCCGT TCCATTATCC GGCACCGGAC TACCGCGAAG ATCTGTTGGG GAGAGGTTGA
|
Protein sequence | MSAEHEYAIE LQGVSFQRGT RAIFDKVDIR IPRGKVTGIM GPSGCGKTTL LRLIAAELRP SAGEVRVAGV NLPSLSRDEL FDMRKQMGVL FQSGALFTDL DVFENVAFPL RVHTQLPEEM IRDIVLMKLQ AVGLRGALEL MPDELSGGMK RRVALARAIA LDPQILLYDE PFVGQDPIAM GVLVRLIRLL NDALGITSVV VSHDLAETAS IADYIYVVGD AQVLGHGTPA ELMESDNPRI RQFMKGTPDG PVPFHYPAPD YREDLLGRG
|
| |