| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0875 |
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| Symbol | |
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| ID | 5108969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 995081 |
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| End bp | 996055 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502091 |
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| Product | KpsF/GutQ family protein |
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| Protein accession | YP_001186375 |
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| Protein GI | 146305910 |
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| COG category | [K] Transcription
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGA CCCGCGACCT GATTGATTCC GCACAGCGTA CCATCCGCCT CGAACTCGAA
GCGGTGCAGG AACTGCTGCC TCGCATCGAC GCCAACTTCA TCAAGGCCTG CGAACTGATT
CTGGCCTGCA AGGGCCGCGT CGTGGTGGTC GGCATGGGTA AATCCGGACA CATCGGCAAC
AAGATCGCTG CCACCCTGGC CAGCACCGGC ACCACGTCCT TCTTCGTCCA CCCGGCAGAA
GCCAGCCATG GCGACATGGG CATGATCACC AAGGACGATA TCGTTCTGGC CCTGTCCAAC
TCCGGCAGCA CCGCGGAAAT CGTCACCCTG CTGCCGCTGA TCAAGCGTCT CGGCATCCGT
CTGATCAGCA TGACCGGCAA CCCGGACTCG CCCCTGGCCA AGGCCGCCGA GGTCAATCTC
GATGCCCGCG TGTCGCAGGA AGCCTGCCCG CTGAACCTGG CGCCGACCTC CTCGACCACC
GCCAGCCTGG TGCTGGGCGA CGCCCTGGCC ATCGCCTTGC TGGAAGCGCG CGGTTTCACC
GCGGAAGACT TCGCCTTCTC CCATCCCGGT GGCGCCCTCG GCCGCCGCCT GCTGCTCAAG
GTGGAAAACG TCATGCACGC AGGCGACGCC CTGCCGCGGG TGAATCGCGG CACCAGCCTG
CGCGATGCGC TGCTGGAGAT GACCCAGAAG GGCCTGGGCA TGACCGTGGT GCTGGAAGCC
GACGGCCGCC TCGCCGGCAT CTTCACCGAC GGCGATCTGC GCCGCACCCT GGACAAGGGC
ATCGACGTGC GCCAGGCCTC GATCGACGAG GTGATGACGC CGCACGGCAA GACCGCCCGC
GCCGAAATGC TCGCCGCCGA GGCCCTGAAG ATCATGGAAG ACCACAAGAT CAATGCACTG
GTGGTGGTGG ACGACCAGGA TCGACCGGTC GGCGCGCTGA ACATGCACGA TCTGCTGCGC
GCGGGAGTAA TGTGA
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| Protein sequence | MNQTRDLIDS AQRTIRLELE AVQELLPRID ANFIKACELI LACKGRVVVV GMGKSGHIGN
KIAATLASTG TTSFFVHPAE ASHGDMGMIT KDDIVLALSN SGSTAEIVTL LPLIKRLGIR
LISMTGNPDS PLAKAAEVNL DARVSQEACP LNLAPTSSTT ASLVLGDALA IALLEARGFT
AEDFAFSHPG GALGRRLLLK VENVMHAGDA LPRVNRGTSL RDALLEMTQK GLGMTVVLEA
DGRLAGIFTD GDLRRTLDKG IDVRQASIDE VMTPHGKTAR AEMLAAEALK IMEDHKINAL
VVVDDQDRPV GALNMHDLLR AGVM
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