| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0872 |
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| Symbol | |
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| ID | 5108966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 993453 |
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| End bp | 993998 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640502088 |
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| Product | OstA family protein |
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| Protein accession | YP_001186372 |
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| Protein GI | 146305907 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0206259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGGTTCG TTAACACCCT CCCCCTGATT CTCGCCCTCG GCGCCGCATT GGGAAGCGCG
AGCGCCTGGG CTCTGCCGTC CGACCGCAAC CAGCCCATTC GCATCCAGGC CGACAGCGCC
GAACTGGATG ACAAGCAGGG CGTGGCGGTG TACCGCGGCG ACGTGATCAT CACTCAGGGC
ACCCTGAAGA TCACCGGCGA CACCGTGACC ATCACCCAGA CCGCCAGCGG CGACATCGAC
GTCTTCACCT CGGTGGGCAA CCTTGCCTAT TACGAGCAGA AGCCGGCAGT GGACAAGGAA
ATCGTCAAGG CCTACGGCCG CACCATCCAG TATTTCGCCA GCAACGAACG CATCGTGCTG
ATCGATCAGG CCAAGGTGAT CCAGGAAGGC AATACCTTCG AAGGCGAGAA GATCGTCTAC
GACACCCGTC GCCAGATCGT CAATGCCGGC CGCGCCACTG GCGGCAATGT CAGCACGCCG
CGCCCGCGCA TCGACATGGT CATCCAGCCG AAGAACAAAC CCGCGGACCA GCAGGCAGAG
CAGTAA
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| Protein sequence | MRFVNTLPLI LALGAALGSA SAWALPSDRN QPIRIQADSA ELDDKQGVAV YRGDVIITQG
TLKITGDTVT ITQTASGDID VFTSVGNLAY YEQKPAVDKE IVKAYGRTIQ YFASNERIVL
IDQAKVIQEG NTFEGEKIVY DTRRQIVNAG RATGGNVSTP RPRIDMVIQP KNKPADQQAE
Q
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