| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0866 |
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| Symbol | |
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| ID | 5108960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 989067 |
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| End bp | 989339 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502082 |
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| Product | phosphotransferase system, phosphocarrier protein HPr |
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| Protein accession | YP_001186366 |
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| Protein GI | 146305901 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
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| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.176719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.959659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCAC GTGAAATCAC CATCATCAAC AAACTCGGCC TGCATGCTCG CGCGGCCGCC
AAGTTCGTTG GCGTGGCCAG CGCCTACCCC TGCGAGGTAC GCATCGGCCG CACCAGCGAC
AGCCTGGTGG ACGGCAAGAG CATCATGGCG GTGATGATGC TGGCAGCCGG CAAGGGCACC
CCGGTGCACC TGCACACCGA GGGCGAACGA GATCACGAGG CGCTGGAAGC ACTGGTCGGG
CTGATCGAGA ACTACTTCGA GGAAGGCGAG TAA
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| Protein sequence | MPAREITIIN KLGLHARAAA KFVGVASAYP CEVRIGRTSD SLVDGKSIMA VMMLAAGKGT
PVHLHTEGER DHEALEALVG LIENYFEEGE
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