| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0860 |
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| Symbol | |
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| ID | 5108954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 979318 |
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| End bp | 980775 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502076 |
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| Product | RNAse G |
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| Protein accession | YP_001186360 |
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| Protein GI | 146305895 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.605963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAG AGATTCTGAT CAATATCACG CCGATGGAGT CGCGCGTGGC GGTGGTGGAA
AACGGCGTGC TGCAGGAAGT GCACGTCGAG CGCACGCAGA AGCGCGGCAT CGTCGGCAAT
ATCTACAAGG GCAAGGTGGT GCGGGTGCTG CCCGGCATGC AGGCGGCGTT CGTCGACATC
GGCCTGGAAC GTGCGGCCTT CATCCATGCC TCGGAGATCT CCACCCGTGA AGGCGCTGCG
GTCGAACCGA TCAGCGCCCT GGTGCACGAA GGGCAGAGTC TGGTGGTGCA GGTCACCAAG
GACCCCATCG GCAGCAAGGG CGCGCGCTTG ACCACCCAGC TGTCGATTCC CTCGCGTTAC
CTGGTGTACA TGCCGCGCAC CAGCCATGTC GGCATCTCGC TGAAGATCGA GGAAGAAGCC
GAGCGCGATC GGCTCAAGCA GGTGGTGGCC GACTGCGTCG CCGCCGAGGG CATCGAGGAG
GCCGGTGGCT TCATCCTGCG CACCGCGGCC GAAGGAGCCG GCGCCGACGA GATTCTCATC
GACATCCGTT ACCTGCGCCG CCTGTGGGAC CAGATCGCCG CTCAGATCCA GAACGCCAAG
GCGCCCTCGG TGATCTACGA GGACCTGTCC CTTGCGCTGC GCACCCTGCG CGACCTGGTC
AGCCCGCGCA CCGAGAAGAT CCGCGTCGAC TCGCGCGAGA CCTTTCAGAA GATCACCCAG
TTCGTCGCCG AGCTGATGCC GGAAATCGCC GACCGCCTGG AGCACTACCC CGGCGAGCGG
CCGATCTTCG ACCTGTACGG CGTCGAAGAC GAAATCCAGC GCGCGCTGGA GCGCAAGGTA
CCGCTGAAAT CCGGTGGCTA CCTGGTGGTC GATCCGGCCG AGGCGATGAG CACCATCGAC
GTCAACACCG GTGCTTTCGT CGGTCACCGC ACGCTGGAAG AGACCATCTT CAAGACCAAC
CTGGAGGCGG CCACCGCCAT TGCCCGTCAG CTGCGCCTGC GCAACCTGGG CGGCATCATC
ATCATCGACT TCATCGACAT GGAGGACGAG GAGCACCAGC GCCAGGTACT GCGCACCCTG
GAGAAGCAGC TGGAGCGCGA CCACGCCAAG ACCAACATCA TCGGCATCAC CGAGCTGGGC
CTGGTGCAGA TGACCCGCAA GCGCACCCGC GAGAGCCTCG AGCAGATTCT CTGCGAGCCG
TGCAGCGCCT GCCAGGGCCG TGGCAAGCTG AAGACGCCGG AAACCATCTG CTACGAGATC
TTCCGCGAGA TCCTGCGCGA GGCTCGGGCT TACCAGGCGG AGGGTTATCG GGTGTTGGCC
AACCAGAAGG TGGTCGACCG CCTGCTCGAT GAAGAATCGG GCAACGTCGC CGATCTGGAA
GCCTTCATCG GTCGCACCAT CAAGTTCCAG GTGGAAACCA TGTACTCCCA GGAACAGTAC
GATGTGGTGC TGCTCTGA
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| Protein sequence | MSEEILINIT PMESRVAVVE NGVLQEVHVE RTQKRGIVGN IYKGKVVRVL PGMQAAFVDI
GLERAAFIHA SEISTREGAA VEPISALVHE GQSLVVQVTK DPIGSKGARL TTQLSIPSRY
LVYMPRTSHV GISLKIEEEA ERDRLKQVVA DCVAAEGIEE AGGFILRTAA EGAGADEILI
DIRYLRRLWD QIAAQIQNAK APSVIYEDLS LALRTLRDLV SPRTEKIRVD SRETFQKITQ
FVAELMPEIA DRLEHYPGER PIFDLYGVED EIQRALERKV PLKSGGYLVV DPAEAMSTID
VNTGAFVGHR TLEETIFKTN LEAATAIARQ LRLRNLGGII IIDFIDMEDE EHQRQVLRTL
EKQLERDHAK TNIIGITELG LVQMTRKRTR ESLEQILCEP CSACQGRGKL KTPETICYEI
FREILREARA YQAEGYRVLA NQKVVDRLLD EESGNVADLE AFIGRTIKFQ VETMYSQEQY
DVVLL
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