| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0858 |
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| Symbol | |
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| ID | 5108952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 978083 |
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| End bp | 978571 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640502074 |
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| Product | rod shape-determining protein MreD |
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| Protein accession | YP_001186358 |
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| Protein GI | 146305893 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2891] Cell shape-determining protein |
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| TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.315529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.930455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCGGTG TTCAATCGCG CAACGGCTGG GTGATCTGGC TCAGCCTGGC GCTCGGATTG
TTGCTCAGTG TTTCACCGCT GCCCGAGTTC ATGCAGATCG GCCGCCCACT GTGGGTCGCG
CTGATCCTCA CCTATTGGGT GCTGGCGTTG CCGCATCGCG TCGGCATGAC CACGGCCTGG
TTGCTGGGGC TGGCACAGGA CGTGTTGTTC GGTACCCTGC TGGGGCAGAA TGCGCTGATC
CTGACCCTGA TCACCTTTCT GGTGCTGAGC CTGCATCAGC GTCTGCGCAT GTTCCCACTG
TGGCAGCAGA GCGTGGTGCT GATGGTGGTG TTCGGCCTGG CGCAGCTGGT GCAGCTGTGG
CTCAACGCCC TGACCGGCAG CCGTCCGCCG ACCCTGGCCT TCGTCCTGCC GGCACTGGTC
AGCGCACTGC TCTGGCCCTG GATCTGCGGC ATCCTGCGCG GCCTGCACCT GCGCCTCAAC
GTCAACTGA
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| Protein sequence | MVGVQSRNGW VIWLSLALGL LLSVSPLPEF MQIGRPLWVA LILTYWVLAL PHRVGMTTAW
LLGLAQDVLF GTLLGQNALI LTLITFLVLS LHQRLRMFPL WQQSVVLMVV FGLAQLVQLW
LNALTGSRPP TLAFVLPALV SALLWPWICG ILRGLHLRLN VN
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