Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0852 |
Symbol | |
ID | 5108946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 971986 |
End bp | 972408 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640502068 |
Product | rare lipoprotein A |
Protein accession | YP_001186352 |
Protein GI | 146305887 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATCC GTAGCCCGGA TGCAATCCGG GAACCTTCAT TGCCCCGGAT TACCTCCGGG CTACGCACCT GCGCATTACT CGGCGCACTC GCCTTGCTGG TCGGCTGTTC CACCTTCGGT GGTGGCTCAG GCAGCAGCGA GACAGGCAAG GCCTCCTATT ACGGCGATCG CCATCACGGG CGCAAGACCG CCAGCGGTGA ACGCTTCGAT CAGCAGGCGC TGACCGCCGC ACACCGCAGC CTGCCGTTCG GCAGCCGGGT CAAGGTCACC AACCTGAACA ACGGCCGCAC CGTGGTGGTC CGTATCAACG ACCGCGGTCC CTTCGTGCGC GGGCGCATCA TCGACGTGTC GCGACGCGCG GCGCAGCAGC TGGACATGCT GCGCTCCGGC GTGGTGCCGG TGCGAGTCGA AGCGCTGGAC TGA
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Protein sequence | MTIRSPDAIR EPSLPRITSG LRTCALLGAL ALLVGCSTFG GGSGSSETGK ASYYGDRHHG RKTASGERFD QQALTAAHRS LPFGSRVKVT NLNNGRTVVV RINDRGPFVR GRIIDVSRRA AQQLDMLRSG VVPVRVEALD
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