| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0845 |
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| Symbol | |
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| ID | 5108939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 964667 |
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| End bp | 966265 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640502061 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001186345 |
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| Protein GI | 146305880 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGA ACGCCGTTAT CCAGGCTTTG CTTACCGCTG GGCTGATCGC CAGCGCCCCC
CTCGCCAGCG CCGCCAATCT GGTGTTCTGC TCCGAGGGCA GCCCCGCCGG TTTCGACCCC
GGCCTGTACA CCACCGGTAC CGATTTCGAC GCGGCAGCGG AAACCGTCTT CAACCGCCTG
ACTCAGTTCG AGCGCGGCGG CACCCAGGTC GAGCCTGGCC TCGCCGAGAG CTGGGAGGTC
TCCGACGACG GCCTGACCTA CACCTTCAAG CTGCGCCCCG GGGTGAAGTT CCACACCACC
GAGTACTTCA AGCCCAGCCG CGAATTCAAC GCCGACGACG TGCTGTTCAC CTTCAACCGC
ATGCTCAACA AGGACGACCC GTTCCGCAAG GCGTACCCCA CCGAGTTCCC GTACTTCACC
GACATGGGCA TGGACAACAA CATCGCCAAG ATCGAGAAAC TCGACGAGCA CACGGTGCGT
TTCACCCTCA ACACCGTCGA TGCCGCGTTC ATCCAGAACA TGGCCATGAG CTTCGCCTCG
ATCCACTCCG CCGAGTACGC TGACCAGTTG CTCAAGGCCG GCAAGGCTGC GGACATCAAC
CAGAAGCCCA TCGGCACGGG CCCGTTCGTG TTCAGCCGTT ACCAGAAGGA CGCGCAGATC
CGTTACAAGG GCAACCAGGA CTACTGGAAG CCGGACGACG TCAAGGTCGA CAACCTGATC
TTCGCCATCA ACACCGACCC GTCGGTGCGC ATGCAGAAGC TGCGCGCCGG CGAGTGCCAT
GTCAGCGTAT TCCCGCGCCC GGCCGACCTG GAAAACCTGA AGAAGGACCC CAAGCTGCAA
ATGCCCGAGC AGGCTGGCTT CAACGTCGGC TACCTGGCCT ACAACACCGA GCACAAGCCA
CTGGACAAGC TCGAAGTACG CCAGGCGCTG GACATGGCGA TCAACAAGCC GGCGATCATC
AACGCCGTCT ATCAAGGCGC CGGCCAGGTG GCGGTCAACG GCATGCCGCC AACCCAATGG
TCCTATGACG ACACCATCAA AGACACCCCC TACAACCCGG AAAAGGCCAA GGAACTGCTC
AAGGCTGCCG GCGTGAAGGA AGGCACCGAA ATCACCCTGT GGGCCATGCC CGTGCAGCGC
CCATACAACC CCAACGCCAA GCTGATGGCC GAGATGCTGC AGGCCGACTG GGCCAAGGTC
GGTATCAAGG CGCGCATCGT CAGCTACGAG TGGGGCGAGT ACAACAAGCG CGCCAAGGCC
GGCGAGCACG ACACCCTGCT GATCGGCTGG ACCGGCGACA ACGGTGACCC CGACAACTGG
CTGGCCGTGC TGTACGGCTG CGACGCCATT GGCGGCAACA ACTACAGCCG CCTGTGCAAC
AAGGAGTTCG ACGCGCTGAT CAAGAAGGCC AAGGCGATCA ACGACCAGGA AGAACGTACC
GTGCTCTACA AGCAGGCCCA ACACCTGCTC AAGGCCGATG TGCAGAACAC GCCCATCGCC
CACTCCACGG TGTACCAGCC GATGAGCACG CGGGTGAAGG ACTTCAAAAT CAGCCCGTTC
GGCCTCAACT CCTTCTATGG TGTGAGCATC GGCAACTGA
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| Protein sequence | MRKNAVIQAL LTAGLIASAP LASAANLVFC SEGSPAGFDP GLYTTGTDFD AAAETVFNRL
TQFERGGTQV EPGLAESWEV SDDGLTYTFK LRPGVKFHTT EYFKPSREFN ADDVLFTFNR
MLNKDDPFRK AYPTEFPYFT DMGMDNNIAK IEKLDEHTVR FTLNTVDAAF IQNMAMSFAS
IHSAEYADQL LKAGKAADIN QKPIGTGPFV FSRYQKDAQI RYKGNQDYWK PDDVKVDNLI
FAINTDPSVR MQKLRAGECH VSVFPRPADL ENLKKDPKLQ MPEQAGFNVG YLAYNTEHKP
LDKLEVRQAL DMAINKPAII NAVYQGAGQV AVNGMPPTQW SYDDTIKDTP YNPEKAKELL
KAAGVKEGTE ITLWAMPVQR PYNPNAKLMA EMLQADWAKV GIKARIVSYE WGEYNKRAKA
GEHDTLLIGW TGDNGDPDNW LAVLYGCDAI GGNNYSRLCN KEFDALIKKA KAINDQEERT
VLYKQAQHLL KADVQNTPIA HSTVYQPMST RVKDFKISPF GLNSFYGVSI GN
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