Gene Pmen_0812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0812 
Symbol 
ID5108906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp924888 
End bp925319 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content64% 
IMG OID640502028 
ProductMerR family transcriptional regulator 
Protein accessionYP_001186312 
Protein GI146305847 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02044] Cu(I)-responsive transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCG GCCAAGCCGC CAAGCACACC GGCCTCAGCG CCAAGATGAT CCGCTACTAC 
GAGTCCATCG ACCTGCTGCC GCGCGCCGGG CGCTCGGAGA GTGGCTATCG GCAATACAAC
GCCAACGACC TGCACCGCCT GGCCTTTATC AAGCGGGCGC GGGATCTGGG GTTTTCTCTG
GAGGAAGTGG GCCGGCTTCT GGCCCTGTGG CAGGACAAGC AGCGCGCCAG TGCCGATGTG
AAGGCGCTGG CCGAGGGACA TATCGCCGAA CTGGAACGCA AGATCGCCGA GATGAGCGCG
TTACGCGATA CGCTGGTGGA GCTGGCCAAC AGTTGTCAGG GCGATAGCCG GCCGGATTGT
CCGATTCTGC AGGGATTGGA GGAAGGGGTG GGCTGCGGTG CGCCGGGGTG TTCGTCGCAC
CGTCAACCGT AG
 
Protein sequence
MNIGQAAKHT GLSAKMIRYY ESIDLLPRAG RSESGYRQYN ANDLHRLAFI KRARDLGFSL 
EEVGRLLALW QDKQRASADV KALAEGHIAE LERKIAEMSA LRDTLVELAN SCQGDSRPDC
PILQGLEEGV GCGAPGCSSH RQP