| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0806 |
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| Symbol | |
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| ID | 5108900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 918534 |
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| End bp | 920765 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502022 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001186306 |
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| Protein GI | 146305841 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCC TCAATTCCCG TACCGCCCTG GCTAGCGCCG TTGCGCTGGC CGCCAGCTTC
GGCGCCCAGG CCAACGAGCC GATCGCCCTG GGCGACGTGG TCGTCAGCGC TTCCGGCTTC
GAACAGAAGA TCACCGAAGC CCCCGCCAGC ATCAGCGTGA TCAGGCGCGA GGAGTTGCAG
CAGAAGCGCT ACAGCAACCT GGCGCAGGCT CTGGGTGATG TTGAGGGCAT CGATATCGGC
CAGGGCACCG GCAAGACTGG CGGGCTGAAC ATCAGCATTC GCGGCATGCC CAGCGACTAC
ACCCTGATCC TCATCGACGG TCGGCGCCAG AACACCGCGG GCAACGTCAC GCCCAACGGC
TTCAACGAAA CCGCCACCAG CTTCATGCCG CCGATGTCCG CCATCGAACG CATCGAGGTG
ATTCGTGGGC CGATGTCGAC CCTGTATGGC TCTGACGCCA TGGGCGGCGT GGTCAACATC
ATCACCCGCA AGGTGGCCAA GGAATGGGGA GCCAGCCTGA GCCTGGACCA CACCTTCCAG
GAGAACCGCG ACTATGGCGC CACCAGCAGC ACCAGCCTCT ATGCCAGCGG CCCGCTGGTC
GAAGGCCTGC TGGGCCTGGC TGTGCGCGGC AGCTTTTATG ACCGCGACGA GTCGGAGCTG
CAGTTCGACA ACGACAGTAC CGTCAGCAAG CGTGGCGCGT CGCCGGTCGA GGGCCGCAAC
GCGACCTTCG GCAGCCGCCT GACGCTGACC CCGAACGAAA GCCACGACTT CTCGCTGGAT
TTCGAGCGCG GCCGTCAGGT CTACAACAAC GACGACTGCC AGCTGGGCAA TCTCGATGGC
AAGAACGGCG GCAGTGCGAC CGACGGCTGC ACCACCAATG CCCCCCTGCG TGCCAATGGC
TACAAGGATG AACTGCGCTT CCAGCGCGAT CAGTTCGCCC TCAGCCATAC CGGACGTTTC
AGCTTCGGTA CGCTGGAAAG CAGCGTCACC CACAACACCA CGGAAACCTT CGGCCGCACC
ATTCCCGGCA ACCCGATCGG CAACTCCTAC ACCGGTTTCC CCTCGATCAT CATCGGCGAC
GACCGCGAGC TGAAGTCGAC CGATCTGGTC GTCGACACCA AACTGGTCGC TCCAGTGGGC
GAATCGCACA TCACCACCGT CGGCGCTCAG TGGTGGGACG CCAAGGTCAC CGACGGCATC
GCCGACGAAG ATTTCCAGCA GACTTCCTGG GCGCTGTTCG CCGAAGACGA GTGGCGTCTG
CGCGACAACC TGGCGCTGAC CCTGGGCGCC CGCTACGAAG ATCATGAAGC CTTCGGCGGC
CACATCAGCC CGCGCGCCTA TCTGGTCTGG AACACCACTG ACGCCTGGAC ACTCAAGGGC
GGCGTCAGCC GTGGCTACAA GACTCCGACA CTCAATCAGC TGCACGACGG CATCAACGGT
GTCACCGGCC AGGGCTCGAC CATCACCATC GGCAGTCCGG ACCTCGACCC GGAGATCACC
ACCAACACCG AAATCGGCGC GTACTACGAC AACCTCGCCA ACTTCAATGC CAACGTCACC
CTGTTCCACA ACAAGTTCAA GGACAAGATC GACGACGGCA CACCGCTGGC GAACTGTTTC
TACACGGCGA ACCCGAACCA GCCAGGCTGC GTGAGCTATG GCCCGGGCTT CACTCAGGAG
AACTTCGCCC AGAGCGTGAA CATCGGCGAG GCCGTGACCA AGGGCGTGGA AGTAGCGGGT
CGCTGGCAGT TCGCACCGGC CTGGGCGCTG GCCCTCAACT ACACCTACAC CGACAGCGAG
CAGAAGAGCG GCATCAACAA AGGCGCGCCC CTCACCAATA CGCCGGAGCA CATGGCCCAT
GCGCGCCTGA GCTGGGCTGC CAATGACCGC CTGACCCTGT GGTTCAAGGG GGAGTATCGC
GGTGAGCGCG CCCGCTTCAC CGATCGTTAC GACAACCTGA CCGCCGCGAA CAAGGCCCTT
TACGATGCAG TCGGTGATCT GAAGGCTTAT GAAGTCTTCC ACCTCGGGGG TTCGTTCAAG
GCGACCGAAA ACCTGACCTT CAGCGCCACG ATCTACAACC TGTTCGACAA GGACTTCACC
AGCGGCAGCT ACTACACCAC CAACACCGGT TCCACCGCAT GGGCGTCCGA CTACACGCAG
ATCGGCCAGT CGACCACCGG CACTCTGGAA GAAGGGCGCC GCCTCTGGCT GTCCACCGTC
ATCGAGTTCT GA
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| Protein sequence | MSALNSRTAL ASAVALAASF GAQANEPIAL GDVVVSASGF EQKITEAPAS ISVIRREELQ
QKRYSNLAQA LGDVEGIDIG QGTGKTGGLN ISIRGMPSDY TLILIDGRRQ NTAGNVTPNG
FNETATSFMP PMSAIERIEV IRGPMSTLYG SDAMGGVVNI ITRKVAKEWG ASLSLDHTFQ
ENRDYGATSS TSLYASGPLV EGLLGLAVRG SFYDRDESEL QFDNDSTVSK RGASPVEGRN
ATFGSRLTLT PNESHDFSLD FERGRQVYNN DDCQLGNLDG KNGGSATDGC TTNAPLRANG
YKDELRFQRD QFALSHTGRF SFGTLESSVT HNTTETFGRT IPGNPIGNSY TGFPSIIIGD
DRELKSTDLV VDTKLVAPVG ESHITTVGAQ WWDAKVTDGI ADEDFQQTSW ALFAEDEWRL
RDNLALTLGA RYEDHEAFGG HISPRAYLVW NTTDAWTLKG GVSRGYKTPT LNQLHDGING
VTGQGSTITI GSPDLDPEIT TNTEIGAYYD NLANFNANVT LFHNKFKDKI DDGTPLANCF
YTANPNQPGC VSYGPGFTQE NFAQSVNIGE AVTKGVEVAG RWQFAPAWAL ALNYTYTDSE
QKSGINKGAP LTNTPEHMAH ARLSWAANDR LTLWFKGEYR GERARFTDRY DNLTAANKAL
YDAVGDLKAY EVFHLGGSFK ATENLTFSAT IYNLFDKDFT SGSYYTTNTG STAWASDYTQ
IGQSTTGTLE EGRRLWLSTV IEF
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