| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0805 |
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| Symbol | |
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| ID | 5108899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 916254 |
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| End bp | 918449 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502021 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001186305 |
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| Protein GI | 146305840 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCCA AGAACTGCCA ACGCTCCCTG CCTTCCAAGC GCCTGCTGGC CACTGCCGTC
GGTCTTGCGG TCGCCTCGCT GACCCTGCCC GCTCTGGCTG ACGACGCCGT GCAGCTGGAC
AATCTGACCG TCAAGGCAAA GAGGGACAGC GGCTACAAGA CGGAGAGCTC CGCATCGGCC
AAGTACGTCA AACCGCTGCT CGATACGCCG CAGACCATCA ATGTGGTGCC GGCCGAGGTG
ATTCGTGAGC AGCAGGCGCT GAGCCTGCGC CAGGTGCTGT CCAACGTCTC CGGCATTACC
TTCAACGCCG GGGAGGGCGG TGGCGGCTCG GGTGACAGCA TCAACATCCG CGGTTTCTCT
GCCAACGCCA ACCTGCAGAT CGACGGCCTG CGCGACAGCG CCCAGACCAG CCGCACCGAC
ACCTTCAATA TCGAGCAGGT CGAGGTCATC AAGGGCCCCA ATTCGGTATT CGGGGGCGCA
GGTACCACGG GCGGCAGCAT CAACATCATC AGCAAGCAGC CGCTGCAGCG AGACTTCACC
GAAATCGGCG CCGGCCTCGG CACCGACAAC TACCACCGCC TGACCCTGGA CACCAACCAG
ACCCTCGATG GCGTGGGTGT CGGCAGCGCC GTACGCCTGA ACCTGATGGC GCACGAGAAC
GATGTCCCCG GGCGTGACCA GATCGACCGT GAGCGCTGGG GCATCGCGCC TTCGCTGGCG
CTGGGCCTGA GCGAGGCGAC TCGCCTGACC CTGAGTTATT TCCATCAGAG CGATGACAAC
CTGCCCGACT ACGGCGTGCC CGCGCTGGAT GGCAAGAAGC TGGCCGGCGT CAGCCGCGAG
GATTACTTCG GCTGGAAGAA TCTGGACAAG GAGCGCATCG AGCAGGACGC GTTCACCGTC
AACCTCGAGC ACGACATCAA CGACGCGCTG CGTCTGCAGA ACCTGACCCG TTACAGCCGT
GTGGATCGCG AGACGGTGGT TTCCGCGTCG CATGTGAACC TGACCGGCGT GCCGGCGGGT
AATTATCGTC CGGCCGGCCC GCAGGGTTAT GGGCGTGACG TCACCACCGA AATGTGGATC
AACCAGACCA ACCTGCGCGC CAGCTTCGAC ACGTCCGGGC TGGCCCACGA GCTGGTCACC
GGTGTCGAGG TGTCGCGCGA GAATCTCGAC CTCAAGACCT ACAACCATGG CCTGGGCAAT
GCCGTGTATC CGGGCAGCGG TTTCGACCTG TCCAACCCGC CCGGTCGCTG GAACGGCCCG
ATCAACAAGA CCACCACCGG TTACACCGAG AACCAGCTGG ATAACCGTGC GCTGTACGTG
TTCGACAGCA TTGCACTGAG CCCGCAGTGG GACCTGAACC TGGGGCTGCG TTATGACTGG
TTCGATGCCG AGAGCGAGTC CTTCTCCGCC AGTCATGTGC GCACCGGCCG CTTCACCTCC
ACTGATGAAG AGCTCAGCAG CCGCGCCGGC CTGGTCTACA AGCCGGCCGA AAATGGCCGC
ATCTACGTCG CCTGGGGCAC CTCCTTCAAC CCCTCGGCGG AGAACGTCGC TTCCAACGGC
GGTGGCTTGA ACGCCGCGAC CCAGAGCCTC AATCCCGAGA AGAACGAGAC CTGGGAGCTG
GGCACCAAGT GGGAGTTGTT CGACGGTCGC CTGATGCTCG ATGGCGCGCT GTTCCGTGTC
GACAAGACCG ATGCGCGCGA GCAGCTGGCC GATGGCAGCT ATATCCTGGC GGGCGAGCAG
CGCGTGCAGG GTGTCGAGCT GGGGGCCACC GGCAAGCTGA GCGAGCGCTG GGACGTCTAC
GCCAACTACA CCTTCCTCGA CAGCGAGACC CTCAAGTCCA CCATCGACCC GAACCGCGAG
GGTCAGGCGC TGGGCAACAC CCCGCCGCAC TCGTTCAACC TGTGGACCAC CTACGAGGTC
GCTCAGGGCT GGACGCTGGG TTATGGCGCC CGTTACGTCA GCGAGCGCAA CGTCAGTGCC
AGCACCCAGG CCAAACTCGA CGCCTACTGG CTGCACAACG CGATGATCGG CTACAAGGTC
AACCGCAACC TCGACCTGCA GCTGAACGTC AACAACCTGT TCGACAAGGA TTACGTCGAG
CGTGTGCGGC AGAACATCGG TACCACCGCC CGCTCCTCGG CCATCGAGTA TGGCGATGCG
CGCTCGGCGA TCCTGTCGGC GACCTACAGT TTCTGA
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| Protein sequence | MRAKNCQRSL PSKRLLATAV GLAVASLTLP ALADDAVQLD NLTVKAKRDS GYKTESSASA
KYVKPLLDTP QTINVVPAEV IREQQALSLR QVLSNVSGIT FNAGEGGGGS GDSINIRGFS
ANANLQIDGL RDSAQTSRTD TFNIEQVEVI KGPNSVFGGA GTTGGSINII SKQPLQRDFT
EIGAGLGTDN YHRLTLDTNQ TLDGVGVGSA VRLNLMAHEN DVPGRDQIDR ERWGIAPSLA
LGLSEATRLT LSYFHQSDDN LPDYGVPALD GKKLAGVSRE DYFGWKNLDK ERIEQDAFTV
NLEHDINDAL RLQNLTRYSR VDRETVVSAS HVNLTGVPAG NYRPAGPQGY GRDVTTEMWI
NQTNLRASFD TSGLAHELVT GVEVSRENLD LKTYNHGLGN AVYPGSGFDL SNPPGRWNGP
INKTTTGYTE NQLDNRALYV FDSIALSPQW DLNLGLRYDW FDAESESFSA SHVRTGRFTS
TDEELSSRAG LVYKPAENGR IYVAWGTSFN PSAENVASNG GGLNAATQSL NPEKNETWEL
GTKWELFDGR LMLDGALFRV DKTDAREQLA DGSYILAGEQ RVQGVELGAT GKLSERWDVY
ANYTFLDSET LKSTIDPNRE GQALGNTPPH SFNLWTTYEV AQGWTLGYGA RYVSERNVSA
STQAKLDAYW LHNAMIGYKV NRNLDLQLNV NNLFDKDYVE RVRQNIGTTA RSSAIEYGDA
RSAILSATYS F
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