| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0801 |
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| Symbol | |
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| ID | 5108895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 910266 |
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| End bp | 911429 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640502017 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_001186301 |
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| Protein GI | 146305836 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.430321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATCA AGGTCGAAGA CTATTACGCA CCCGCCACTT TTGCCCGCAT GAAGGCGTTC
GCCGATCAGC ACGAAACCCC GTTCGTGGTG ATCGACCGGC AGATCATCAG TGACGCCTAC
GATCAGTTGG GCAACTGCTT CCCCTTCGCC AAGATCTACT ACGCGGTCAA GGCCAACCCC
GCCGTCGAGA TCATCGAACT GCTGCGCGAC AAGGGTTCGA GCTTCGACAT CGCCTCGATC
TACGAGCTGG ACAAGGTCAT GGCCACCGGT GTCGGCCCGG AGCGCATCAG CTACGGCAAC
ACCATCAAGA AGTCGCGCGA CATCCGTTAT TTCTTCGACA AGGGCGTGCG CCTGTTCGCC
ACCGACTCCG AGGCCGACCT GCGCAACATC GCCAAGGCCG CGCCGGGCTC GAAGATCTAC
GTGCGCATCC TTACCGAAGG CTCCACCAGC GCCGACTGGC CGCTGAGCCG CAAGTTCGGC
TGCCAGCCGG ACATGGCCCT GGACCTGCTG ATCCTGGCTA AGCAGCTGGG CCTGGTGCCC
TACGGCATCT CCTTCCACGT CGGCAGCCAG CAGCGCGATA TCGATGTGTG GGACGCCGCC
ATCGCCAAGG TCAAGGTGAT CTTCGAGCGC CTGCGCGAGG AAGACGGCAT CACCCTGCAG
ATGATCAACA TGGGCGGCGG CTTCCCGGCC AACTACATCC AGCGCACCAA CGACCTGGAA
ACCTATGCCG AGGAAATCAC CCGCTTCCTC AAGGAAGACT TCGGTGACGA TCTGCCGGAG
ATCATCCTTG AGCCGGGCCG TTCGCTGATC GCCAACGCCG GCGTGCTGGT GTCCGAAGTG
GTGCTGGTGG CGCGCAAGTC GCGCACCGCG GTCGAGCGCT GGGTGTATGC CGATGTCGGC
AAGTTCAGCG GCCTGATCGA AACCATGGAC GAGTCGATCA AGTTCCCCAT CTGGACCGAG
AAGAAGGGCG AGATGGAAGA GGTGGTGATC GCCGGCCCGA CCTGCGACAG CGCCGACATC
ATGTACGAGC ACTACAAGTA CGGCCTGCCG CTGAACCTGG CCAGCGGCGA CCGCCTGTAC
TGGCTGTCCA CCGGCGCCTA CACCACCAGC TACAGCGCGG TGGAATTCAA CGGCTTCCCG
CCGCTGAAGT CCTACTACCT GTAA
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| Protein sequence | MSIKVEDYYA PATFARMKAF ADQHETPFVV IDRQIISDAY DQLGNCFPFA KIYYAVKANP
AVEIIELLRD KGSSFDIASI YELDKVMATG VGPERISYGN TIKKSRDIRY FFDKGVRLFA
TDSEADLRNI AKAAPGSKIY VRILTEGSTS ADWPLSRKFG CQPDMALDLL ILAKQLGLVP
YGISFHVGSQ QRDIDVWDAA IAKVKVIFER LREEDGITLQ MINMGGGFPA NYIQRTNDLE
TYAEEITRFL KEDFGDDLPE IILEPGRSLI ANAGVLVSEV VLVARKSRTA VERWVYADVG
KFSGLIETMD ESIKFPIWTE KKGEMEEVVI AGPTCDSADI MYEHYKYGLP LNLASGDRLY
WLSTGAYTTS YSAVEFNGFP PLKSYYL
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