| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0785 |
|---|
| Symbol | |
|---|
| ID | 5108879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 885568 |
|---|
| End bp | 886560 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640502001 |
|---|
| Product | DNA-binding transcriptional regulator FruR |
|---|
| Protein accession | YP_001186285 |
|---|
| Protein GI | 146305820 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02417] D-fructose-responsive transcription factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACTCA GCGACATCGC CCGCCTGGCT CAGGTCTCGG TGACCACCGC CAGCTACGTG
ATCAACGGCC AGGCCGAACG CCGGCGTATC AGCCCGGCAA CCGTTGAGCG GGTGCTGGCC
GTGGTGCAGG AACATGGCTA CAGGCCGGAT CAGCAGGCCG CCAGCCTGCG CCGCGGACAG
AGCCGCTGCT TGGGCTTCAT CCTCCCCGAC CTGGAGAACC CCAGCTATGC GCGCCTGGCC
AAGCTGCTGG AGCAGAAGGC GCGGGCCGCG GGCTACCAGT TGCTGATCGC CAGCTCCGAC
GATGACCCCG ACAGCGAGCG GCAGCTGCTG GAGCTGTTCC GCTCGCGCCG CTGCGAAGCG
CTGATCGTCG CCAGCTGCCT GCCGGCGGAT GATCCGCTGT ACCCCGAGCT GGTCGCCTCC
GGCCTGCCAG TGGTGGCAGT GGACCGCGCG CTGTCGCCTC AGCACATCCG CTCGGTGGTC
AGCGATGACG AACAGGCCGG CCGCCGCCTC ACCGAAAGCC TGCTGCAACC GGCGCCGCGG
CATATCGCCC TGCTCGGCGC ACGCCCGCAG CTGGTGATCA GCCAGGCGCG CGAACGCGGT
TTCCGCGCGG CGCTGGCCGG CTTCGACGGC CGCGTCAGCG TCTATCACGG CGAGCTGTTC
AACCGCGCCA GCGGCCACCG CCAGATGCGC GCACTGCTGG CCGAGGCCGG CCCGCCCGAC
GCGCTGCTGA CCACTGCCTA CGTGCTGCTC GAAGGGGTAT TCGATGCCCT GCGCGAACAG
GGCGGCGCGA GCTGGCCGGC GGTGCGCCTG GCCACCTTCG GCGATACCCA GTTGCTGGAT
TTTCTGCCGG TGCGGGTCAA CGCCATGAGC CAGCAGCACG AACGCATCGC CGAACGGGTG
CTGGCCTGGA CGCTGCAGGC GGTCGAGCAG GACGACTATC AGCCCGGCAT CGAGGCCATC
GAGCGCAGCT TCAAGGCCCG CCCCCAGAGG TAG
|
|---|
| Protein sequence | MKLSDIARLA QVSVTTASYV INGQAERRRI SPATVERVLA VVQEHGYRPD QQAASLRRGQ
SRCLGFILPD LENPSYARLA KLLEQKARAA GYQLLIASSD DDPDSERQLL ELFRSRRCEA
LIVASCLPAD DPLYPELVAS GLPVVAVDRA LSPQHIRSVV SDDEQAGRRL TESLLQPAPR
HIALLGARPQ LVISQARERG FRAALAGFDG RVSVYHGELF NRASGHRQMR ALLAEAGPPD
ALLTTAYVLL EGVFDALREQ GGASWPAVRL ATFGDTQLLD FLPVRVNAMS QQHERIAERV
LAWTLQAVEQ DDYQPGIEAI ERSFKARPQR
|
|---|
| |