| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0782 |
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| Symbol | |
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| ID | 5108876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 880464 |
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| End bp | 882494 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501998 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001186282 |
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| Protein GI | 146305817 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.770301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGACCG TGTTGTATCC GGCCATCGCG CTGATGAACC GCCTCAGCTT CGGCATGAAG
TTCAGCCTGA TCAGCGTTCT GTTCTTCCTG CCCATGCTGG TCACCAATTT CTATCTGGTG
CGCGACTCCT ATCGCCAGTT CGTCGGTACG CAGACGGCCC TGGAGAGCCT CGAGCTGCTC
GGCGGCAGCC TGCAGTTGCG TCGGGATCTG CAGAGCCTCA ACGACCTGGT GCAGATCAAC
GCGATGATCG GCCAGTCCGG CCAGGCTGGC GATCTCGAGG GTCGCATCGG TCAGCTGCAG
CAGTCGCTGG CCGACAGTCT GCAAGCCTTG CAACCCGTGG CGCGCGACGC CGAGCAAGCG
GCCGAGTTCG TCGCCAAGCG CGATGAGCTG CTGGCCGAGC TGAAAAGCGC GGTGGCCGAG
ACATCCCTGC AAAGCAAGAC GGTGATAGTC GAGAAGCTGC TCGGCTCCTC CCAGGTGTTC
ACTAAGCTGG TGGCCAGCCA GGCCGGCCTC AGCCAGGACC CGCAACGCCA GGTGCGGCAG
ATCACCGAGC TGATCACCAA TGTCACGCCG CAAGTCACCG ATGTGCTCAG TCAGGGCCGC
GCGCTCGGTG CCTATTCCCT GGGCCAGGGG TTTCTCAACT CCGCGGCCAG TACCAAGTTC
GACGATCTGC TGCTGCAACT GGAAAAGCTG CATGCCGAGT ACGGCCTGAA CCTGCAGGAT
GCGCTGGCCG GCAACGTCGC CGCGCAGAAC GGCCTCGGCG GTCTGGCCGA GGCCAGCCGG
CAGACTCTCA AGGACAGCGC CGTGCTGTTC GAGGATCAGG TGATCATCGC CGATAGCCTG
GATACGCCTT GGACCCAGTT CTACGACCAG GTCAGCCAGC AGATGGCCAA GACCTACGCC
TTCAACGACG GCCTGCTGGC CTTCCTCGAT AGCCAGCTGA GCGAGCGCCT GGTCGATAAC
CGCGCACAGA TGGTGCTGCT GGTGGTCGCC CTGGTGGTGG TGTTCCTGCT GATCGTCTAC
CTCTACAGCG GTTTCTACGT GTCCACGCGC ACCACCCTGA AGACCCTCGG CCAGGTGATG
GACAAGGTGG CGGCAGGCGA CATGACGGTC AGCTTCCGCG CGCAGAGCCG CGACGAGCTG
GGCGAGCTGG GCCAGGTGTT CAACCAGACC GTGGCGCGCA TTCACGATCT GATCGAGCGC
GTCGGGCATA CCGTGGGCGA GGTCGGCGGC CAGGCCGATC GCGTCGAGTT GGTGTCCGGC
GAAAGCAACC AGGCGGTGGC TGGCCAGCGC GCGCAGATCG AACAGGTGGC CACGGCGATG
AACCAGATGT CCGCCACTGC CCAGGAGGTG GCGCGCAGTG CTGCCGCAGC GGTGGGCAGT
GCGCAGAGCG TCAATCAGGA GACCGTCAGC GGTCGCGCGC TGGTCGAGGC GCAGGTCGGC
GCGATTCAGC GTCTGGCCAG CGAGATCGAC CAGTCGGTGG CGGTGATCAA CCAACTGGCC
AGCGACAGCG CCGCCATCAG TCAGGTGCTG GACGTGATCA AGGGCATCGC CGAGCAGACC
AACCTGCTGG CGCTCAACGC GGCCATCGAG GCGGCGCGGG CCGGCGAGCA GGGCCGCGGC
TTCGCCGTGG TGGCCGATGA GGTGCGCAAC CTGGCCAAGC GCACCCAGCA GTCCACCGAG
GAAATCGAGG CGATGATCGC CAAGCTGCAG GGTGGCGTCG GTGCCGCGGT GAAGGCGATG
AACGCCAGCC ACCAGATGGC CGACGGCACG GTCAGTGAAT CCGGCAAGGT ACAGCAGGCG
CTGGAGAACA TCCTCGGCGC GGTCGGCATG ATCGTCGACC AGAACCAGCA GATCGCTGCG
GCGGCCGAGC AGCAGACGGC GGTGGCGCAC GATATCGATC AGAACATCGT CGAGATCAAC
CATGCCGGCG AGCGCACGGC TGCCGGCGCC AGCCAGACCG AGCAGGCCAG CCGCGAGCTC
AGCGAGCTGG TGGCGCGGCT CAAGCAGCTG ATCGGCGCAT TCCGGGTGTA G
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| Protein sequence | MKTVLYPAIA LMNRLSFGMK FSLISVLFFL PMLVTNFYLV RDSYRQFVGT QTALESLELL
GGSLQLRRDL QSLNDLVQIN AMIGQSGQAG DLEGRIGQLQ QSLADSLQAL QPVARDAEQA
AEFVAKRDEL LAELKSAVAE TSLQSKTVIV EKLLGSSQVF TKLVASQAGL SQDPQRQVRQ
ITELITNVTP QVTDVLSQGR ALGAYSLGQG FLNSAASTKF DDLLLQLEKL HAEYGLNLQD
ALAGNVAAQN GLGGLAEASR QTLKDSAVLF EDQVIIADSL DTPWTQFYDQ VSQQMAKTYA
FNDGLLAFLD SQLSERLVDN RAQMVLLVVA LVVVFLLIVY LYSGFYVSTR TTLKTLGQVM
DKVAAGDMTV SFRAQSRDEL GELGQVFNQT VARIHDLIER VGHTVGEVGG QADRVELVSG
ESNQAVAGQR AQIEQVATAM NQMSATAQEV ARSAAAAVGS AQSVNQETVS GRALVEAQVG
AIQRLASEID QSVAVINQLA SDSAAISQVL DVIKGIAEQT NLLALNAAIE AARAGEQGRG
FAVVADEVRN LAKRTQQSTE EIEAMIAKLQ GGVGAAVKAM NASHQMADGT VSESGKVQQA
LENILGAVGM IVDQNQQIAA AAEQQTAVAH DIDQNIVEIN HAGERTAAGA SQTEQASREL
SELVARLKQL IGAFRV
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