| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0773 |
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| Symbol | |
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| ID | 5108867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 868675 |
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| End bp | 869544 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640501989 |
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| Product | prepilin peptidase |
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| Protein accession | YP_001186273 |
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| Protein GI | 146305808 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCATCA TCGACCTTCT GGCCAGCCAT GTGCTGGCCT TTGTTTTATG CGCCCTGCTG
CTGGGCCTGC TGGTCGGCAG CTTTCTCAAT GTTGTGATCT ATCGCTTGCC CCTGATGCTG
CAGCGCGATT GGCAGAGCCA GGCGCGCGAG GTGCTGGAGT TACCGGCAGC GCCACCCGCA
CAGACCTTCA ATCTGATTCT CCCCAACTCA TCGTGCCCGC AATGCGGCCA TGAGATTCGC
CCCTGGGAGA ACATCCCGGT CATCAGCTAC CTGTTCCTGC GCGGCAAGTG CTCGAACTGC
AAGACACCGA TCAGCAAGCG CTATCCCTTG GTAGAGCTAG TTTGCGGACT GCTTTCCGGC
TACATCGCCT GGCATTTCGG TTTTACCTGG CAGGCTGGCG CGATGCTGGT GCTGGCCTGG
GGGCTGCTGG CGATGAGTCT GATCGATGCC GATCATCAAA TTCTGCCGGA CGTACTGGTG
CTGCCGCTGT TGTGGCTGGG CTTGATCGTC AATTACTTCG GGCTGTTCAC CAACCTGGAG
GACGCGCTGT GGGGAGCGAT TGCCGGTTAT CTGAGCCTGT GGTCGGTGTA CTGGCTGTTC
AAGCTGATCA CCGGCAAGGA AGGCATGGGT TACGGTGACT TCAAGCTGCT GGCGATGCTC
GGCGCCTGGG GTGGCTGGCA GATCCTGCCT TTGACCATTC TGCTTTCCTC GCTGGTCGGG
GCGGTGCTTG GGGTGATTCT GCTGCGCCTG CGTGGTAGCG ATTCCAGTAC GCCGATCCCC
TTCGGACCCT ATCTGGCCAT TGCCGGCTGG ATCGCCCTGC TCTGGGGTGA CGTGATTACC
GGTAGCTACC TGAAGTTTGC CGGGTTCTGA
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| Protein sequence | MLIIDLLASH VLAFVLCALL LGLLVGSFLN VVIYRLPLML QRDWQSQARE VLELPAAPPA
QTFNLILPNS SCPQCGHEIR PWENIPVISY LFLRGKCSNC KTPISKRYPL VELVCGLLSG
YIAWHFGFTW QAGAMLVLAW GLLAMSLIDA DHQILPDVLV LPLLWLGLIV NYFGLFTNLE
DALWGAIAGY LSLWSVYWLF KLITGKEGMG YGDFKLLAML GAWGGWQILP LTILLSSLVG
AVLGVILLRL RGSDSSTPIP FGPYLAIAGW IALLWGDVIT GSYLKFAGF
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