| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0732 |
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| Symbol | |
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| ID | 5108826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 825145 |
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| End bp | 827469 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640501945 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_001186232 |
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| Protein GI | 146305767 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTCA AACGCTGGCG GCGTCGGCTG CTGATCCTTC TGCTTCCCCT CGCCCTGCTC
TGGCTGGCCG ACCGCCTGTT CCCGCTGCCT CTGCCCGAAG ACGACCTGGC GCGCGTGGTG
CTGGCCGAAG ACGGCACGCC GCTGTGGCGT TTCGCCGACC ATGACGGCGT GTGGCGCTAC
CCGGTGACGC CGGGCGAGGT CTCGCCCTAT TACCTCGAAG CATTGCTGAC CTACGAGGAT
CGCTGGTTCC GCCAGCACCC CGGCATCAAC CCGCTGGCGC TGGGCCGTGC GGCCTGGCAG
AACCTGACCG GCGGGCGTGT GGTGTCCGGC GGCAGCACGC TGTCGATGCA GGTGGCGCGC
CTGCTCGATC CGCACGGGCG CAATCTGCCG GGCAAGCTCA AGCAGCTATG GCGCACCGCG
CAGCTGGAAT GGCACCTGTC CAAGGATGAA ATCCTCACCC TGTATCTCAA TCGCGCGCCC
TTCGGCGGCA CCCTGGAGGG CGTGGCCGCC GCCAGCTGGA GCTATCTGGG CAAGCCGCCG
AGCCAACTGA CTCGCGCCGA CGCCGCGCTG CTCGCCGTGC TGCCGCAGGC GCCCAGCCGG
CTGCGCCCGG ACCGTCATCC CGAGCGAGCC CAGGCGGCGC GCGACAAGGT GCTGCGGCGC
CTGGGCGAAT TTCAGGTGTG GCCGCAGGCG CAGGTGGACG AAGCGCTGGA AGAGCCGGTG
TTCCTCGCGC CGCGCCGTGA GCCGAGCCTG GCACCCCTGC TGGCGCGGCG GTTGAACCGC
GCCGGCAGCC CGCCGCTGAT TCGCACCACG CTGGATGCGG GTTTGCAGCT GCGCCTGGAG
GATCTGCTGC TGGGCTGGCG CGCGCGCCTG CCGGAGCGCA CCTCGGCGGC GATCCTGGTG
GTGGAGCACG AAAGCATGGC CGTGCGCGCC TACCTGGGCT CGGTGGACAT CGCCGACACC
TCGCGCTTCG GTCACGTCGA CATGGTGCGC GCCCTGCGCT CGCCCGGCTC GACGCTCAAG
CCCTTTCTCT ACGGCATGGC CCTGGATGCC GGGCTGATCC ACTCCGAATC GCTGCTGCAG
GACGTGCCGC GGCATTACGG CGACTACCGT CCCGGCAATT TCGCCGCCGG CTTCGTCGGC
CCGGTGTCGG CCAGCGAGGC GCTGGCCACC TCGCTCAACC TGCCGGCCGT GCAGCTGCTC
GAAGCCTACG GGCCGAAGCG TTTTGCCGGC GAGCTGCGCA GCGCGGGGCT GCCGATTCGT
CTGCCGGCGC TGGCCGAGCC CAACCTGGCG CTGATTCTCG GCGGCGGCGG CGCGCGTCTG
GAATCGCTGC TGGCCGGTTA CAGCGCCTTC GCCCGCGGCG GCATGGCGGC CCGTCCACGC
CTGCAGCCAG ACGATGAATT GCGCGAGCGC CGTTTGCTGT CCCCCGGTTC GGCCTGGATC
ATCCGGCGCA TTCTCAGCGG CCAGGCGCGC CCGGATCGTG ACCCGCGCGC ACAGCTGGCG
CAGCGCCCGA CCCTGGCCTG GAAGACCGGC ACCAGTTACG GCTTTCGCGA TGCCTGGGCC
ATCGGCGTCG GCCCGCGTCA CCTGATCGGC ATCTGGATCG GCCGCCCGGA CGGCACCCCG
GTGCCCGGCC AGTTCGGTCT GGCTTCCGCC GCGCCGCTGC TGTTGCAGGT GCATGATCTG
CTGGTCAATC GCGACAGTCA GCGCGGCATC GCCGCACCGG CCGATCCGCA GCCGGCCGAG
GTCGGCGTGG CTGCCATCTG CTGGCCGCTG GGCCAGCCGA TGAGCAAGGA CGACCCCAAC
TGCCGACGCC TGCGCTTCGC CTGGACGATC GAGGGCACCA CGCCGCCTAC CTTGCAGGCA
GCCGATCAGC CGGTGGGCAG CGGCCGGCGC GAGCGCTACT GGGTCAATGC CGAAGGCCGA
CGCGTGGGCC CCGGCTGCGC CGGTGCGCAG ATGCGCGAGC TGCTGCTGTG GCCGGCGCCG
CTGGAGCCCT GGCTGCCGCG GCGCGAGCGA CGTGCCGCTC GTCTGCCCCT GGCCGATGCA
CACTGCCCGC CGCCAGCGCA GGCGCAACTG GCGCCGCTGA CCATCGTCGG GGTGCGCCAG
GGCGAGCGTC TGCGCCAGCC GCAAGCCGGC GGCGAGGCGC TGCGCCTGAG CCTTTCCGCC
CTGGGCGGCA GCGGCCGGCG CTGGTGGTTC GTCGATGGTC GGCCGCTGGG CGACAGCGCG
ATGGATGCAC CTTTCAGTCA TGCCTTCGAA CCCGGGCAGC ATCAGCTCAG CGTGCTCGAC
GAGGCAGGTC AGACCGCCCG TGTGCAGTTC GAGGTGACGC GTTGA
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| Protein sequence | MPFKRWRRRL LILLLPLALL WLADRLFPLP LPEDDLARVV LAEDGTPLWR FADHDGVWRY
PVTPGEVSPY YLEALLTYED RWFRQHPGIN PLALGRAAWQ NLTGGRVVSG GSTLSMQVAR
LLDPHGRNLP GKLKQLWRTA QLEWHLSKDE ILTLYLNRAP FGGTLEGVAA ASWSYLGKPP
SQLTRADAAL LAVLPQAPSR LRPDRHPERA QAARDKVLRR LGEFQVWPQA QVDEALEEPV
FLAPRREPSL APLLARRLNR AGSPPLIRTT LDAGLQLRLE DLLLGWRARL PERTSAAILV
VEHESMAVRA YLGSVDIADT SRFGHVDMVR ALRSPGSTLK PFLYGMALDA GLIHSESLLQ
DVPRHYGDYR PGNFAAGFVG PVSASEALAT SLNLPAVQLL EAYGPKRFAG ELRSAGLPIR
LPALAEPNLA LILGGGGARL ESLLAGYSAF ARGGMAARPR LQPDDELRER RLLSPGSAWI
IRRILSGQAR PDRDPRAQLA QRPTLAWKTG TSYGFRDAWA IGVGPRHLIG IWIGRPDGTP
VPGQFGLASA APLLLQVHDL LVNRDSQRGI AAPADPQPAE VGVAAICWPL GQPMSKDDPN
CRRLRFAWTI EGTTPPTLQA ADQPVGSGRR ERYWVNAEGR RVGPGCAGAQ MRELLLWPAP
LEPWLPRRER RAARLPLADA HCPPPAQAQL APLTIVGVRQ GERLRQPQAG GEALRLSLSA
LGGSGRRWWF VDGRPLGDSA MDAPFSHAFE PGQHQLSVLD EAGQTARVQF EVTR
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