Gene Pmen_0726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0726 
Symbol 
ID5109056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp815016 
End bp815450 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content64% 
IMG OID640501939 
Producttranslation initiation factor 1 (eIF-1/SUI1) 
Protein accessionYP_001186226 
Protein GI146305761 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01158] translation initation factor SUI1, putative, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGCTTC GCGGTCGACG CCCGTCGGCC AGTCGCTATC CTGACCCCTA CGAGGACAAG 
CCGGTGGTCA AGAAAGCTTC GTCATTTTCC GCCCTGAGCG GTCTCGTCTA CTCCACCGAT
GGCGGTCGCC ATTGCCCGGA CTGCAACCAG CCGGTGGATG CCTGCATCTG CAAACAGACG
CGCATTCCCG AAGGCGATGG TATCGCCCGC GTACGCCGTG AAACCAAGGG CCGTGGCGGC
AAGACGGTGA CCACGGTAAG CGGCGTGCCG CTGGCCGAGG AACCGCTCAA GGAGCTGGCC
AGTGCGCTGA AGAAGCGTTG CGGTACCGGT GGCGCGCTCA AGGACGGGGT GATCGAGATT
CAGGGCGATC ATGTCGAACT GCTGTTGGCC GAACTGAGCA AGCGCGGTTT TACCGCGAAG
AAGTCCGGCG GCTGA
 
Protein sequence
MGLRGRRPSA SRYPDPYEDK PVVKKASSFS ALSGLVYSTD GGRHCPDCNQ PVDACICKQT 
RIPEGDGIAR VRRETKGRGG KTVTTVSGVP LAEEPLKELA SALKKRCGTG GALKDGVIEI
QGDHVELLLA ELSKRGFTAK KSGG