Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0713 |
Symbol | |
ID | 5109043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 792020 |
End bp | 793375 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640501926 |
Product | acetyl-CoA carboxylase biotin carboxylase subunit |
Protein accession | YP_001186213 |
Protein GI | 146305748 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0439] Biotin carboxylase |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAAGC TGGAAAAAGT CCTTATCGCC AACCGTGGCG AAATCGCCCT GCGCATCCTG CGCGCCTGCA AGGAACTGGG CATCAAGACG GTGGCCGTGC ACTCCACCGC CGACCGCGAA CTGATGCACC TGGGCCTGGC CGACGAGTCC GTCTGCATTG GTCCGGCGCC CGGGGCGAAG TCCTACCTGA ACATCCCGGC CATCATCAGC GCCGCTGAAG TGACCGGCGC CACCGCCATC CACCCGGGTT ACGGCTTCCT CGCCGAGAAC GCCGACTTCG CCGAGCAGGT GGAGAACTCC GGCTTCGCCT TCATCGGCCC GAAAGCCGAC GTGATCCGCC TGATGGGTGA CAAGGTGTCG GCCAAGGACG CCATGATCAA GTCCGGCGTG CCGGTGGTAC CGGGCTCCGA CGGCCCGCTG CCGGAAGACG AGGAAGAGGC CCTGCGCATC GCCCGCGAAG TGGGCTACCC GGTGATCATC AAGGCCGCCG GCGGCGGCGG TGGTCGCGGC ATGCGCGTGG TGCACAAGGA AGAAGACCTG ATCAAGTCGG CCAAGCTGAC CCGCACCGAA GCCGGTGCCG CGTTCGGCAA CCCGATGGTC TATCTGGAAA AGTTCCTCGG CAACCCGCGT CACGTGGAAG TCCAGGTGCT GTCCGACGGC CAGGGCAACG CCATCCACCT GTATGACCGC GACTGCTCGC TGCAGCGTCG CCACCAGAAG GTGATCGAGG AGGCTCCGGC CCCGCTGATC GACGAGAAGG CCCGCGCCGA AGTGCTCAAG CGCTGCGTCG ATGCCTGCGT CGAAATCGGC TACCGTGGCG CCGGCACCTT CGAGTTCCTC TATGAAGACG GCCGTTTCTA CTTCATCGAG ATGAACACCC GCGTTCAGGT GGAGCACCCG GTCACCGAGA TGGTCACCGG CATCGACATC GTCAAGGAGA TGCTCAGCAT CGCCGCCGGC AACAAGCTGT CGATCAAGCA GGAAGACGTG AAGATCCTCG GCCACTCCAT CGAGTGCCGG ATCAACGCCG AAGACCCGGA CAACTTCATG CCCAGCCCCG GCAAGGTCAA GCATTTCCAT GCTCCGGGCG GCAATGGCGT GCGTGTCGAC TCGCACCTGT ACAGCGGCTA CAGCGTGCCG CCGCACTACG ACTCGCTGAT CGGCAAGCTG ATCACCTTCG GCAAGGATCG CGACGAGGCC ATGGCGCGCA TGCGCAACGC CCTGGACGAG ATCGTGGTCG ACGGCATCAA GACCAACGTG CCGCTGCACC GCGACCTGAC CCGTGACAAG GGTTTCGTCA AAGGCGGCGT GAACATCCAC TACCTGGAAA AGAAACTGGG TATGGACAAG CACTGA
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Protein sequence | MQKLEKVLIA NRGEIALRIL RACKELGIKT VAVHSTADRE LMHLGLADES VCIGPAPGAK SYLNIPAIIS AAEVTGATAI HPGYGFLAEN ADFAEQVENS GFAFIGPKAD VIRLMGDKVS AKDAMIKSGV PVVPGSDGPL PEDEEEALRI AREVGYPVII KAAGGGGGRG MRVVHKEEDL IKSAKLTRTE AGAAFGNPMV YLEKFLGNPR HVEVQVLSDG QGNAIHLYDR DCSLQRRHQK VIEEAPAPLI DEKARAEVLK RCVDACVEIG YRGAGTFEFL YEDGRFYFIE MNTRVQVEHP VTEMVTGIDI VKEMLSIAAG NKLSIKQEDV KILGHSIECR INAEDPDNFM PSPGKVKHFH APGGNGVRVD SHLYSGYSVP PHYDSLIGKL ITFGKDRDEA MARMRNALDE IVVDGIKTNV PLHRDLTRDK GFVKGGVNIH YLEKKLGMDK H
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