Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0712 |
Symbol | prmA |
ID | 5109042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 791002 |
End bp | 791880 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640501925 |
Product | ribosomal protein L11 methyltransferase |
Protein accession | YP_001186212 |
Protein GI | 146305747 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2264] Ribosomal protein L11 methylase |
TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTGGT TACAAGTCCG TCTCGCCATC ACGCCCGAGC AGGCGGAGAC CTTCGAGGAC GCCCTGCTCG AAGTCGGCGC CGTGTCGGTG ACCTTCATGG ACGCCGAAGA CCAGCCGATC TTCGAGCCGG ACCTGGGCAC CACCCCGCTG TGGTCACACA CCCACCTGCT GGCCCTGTTC GAAGCCGACA CCGACGAGAC CGCACTGATC GCCCACCTGC AGCTGCTGTG TGGCGGCACG CTGCCGGAGC ATCATGTCGA GCGCATCGAG GATCAGGACT GGGAACGCAG CTGGATGGAC AACTTCCAGC CGATGCGTTT CGGCCAGCGT CTGTGGATCG TGCCGAGCTG GCATGCCGCG CCCGAGCCGG ATGCGGTCAA CCTGCTGCTC GATCCGGGCC TGGCCTTCGG CACCGGCACC CACCCGACCA CCGCACTGTG CCTGGAATGG CTCGACGGCC AGAATCTGGA CGGCTGCCGG GTACTCGACT TCGGCTGTGG CTCGGGCATC CTCGCCATCG CCGCCCTGCT GCTCGGCGCG CCGCAGGCGG TGGGCACCGA TATCGATCCG CAGGCGCTGG AAGCCTCGCG CGACAATGCC AATCGCAACG GCATCGACCC GGCACGCTTT CCGGTGTACC TGCCGGCCGA TCTGCCGCAG CAGCCGGCCG AGGTGGTGGT GGCCAATATC CTGGCCGGTC CGCTGGTTTC CCTGGCACCG CAGATCACCG CGCTGGTCCA AGAAGGTGGA CGCCTGGCGC TGTCGGGCAT CCTCGCCGAA CAGGCCGAGG AAGTTCGCGC CGCCTACGCC GGCGCCTTCG ACCTCGACCC GACGGCAATC AAGGATGGCT GGGTACGCAT CAGCGGGGTG AAGCGCTAG
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Protein sequence | MPWLQVRLAI TPEQAETFED ALLEVGAVSV TFMDAEDQPI FEPDLGTTPL WSHTHLLALF EADTDETALI AHLQLLCGGT LPEHHVERIE DQDWERSWMD NFQPMRFGQR LWIVPSWHAA PEPDAVNLLL DPGLAFGTGT HPTTALCLEW LDGQNLDGCR VLDFGCGSGI LAIAALLLGA PQAVGTDIDP QALEASRDNA NRNGIDPARF PVYLPADLPQ QPAEVVVANI LAGPLVSLAP QITALVQEGG RLALSGILAE QAEEVRAAYA GAFDLDPTAI KDGWVRISGV KR
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